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View Structure Prediction Details

Protein: Cpsf73-PA
Organism: Drosophila melanogaster
Length: 684 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Cpsf73-PA.

Description E-value Query
Range
Subject
Range
gi|54638265, gi|... - gi|54638265|gb|EAL27667.1| GA20526-PA [Drosophila pseudoobscura], gi|125774535|ref|XP_001358526.1| G...
560.0 [0..1] [683..1]

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Predicted Domain #1
Region A:
Residues: [1-465]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQATGDARM PDEESDLLQI KPLGAGQEVG RSCIMLEFKG KKIMLDCGIH PGLSGMDALP  60
   61 YVDLIEADEI DLLFISHFHL DHCGALPWFL MKTSFKGRCF MTHATKAIYR WMLSDYIKIS 120
  121 NISTEQMLYT EADLEASMEK IETINFHEER DVMGVRFCAY IAGHVLGAAM FMIEIAGIKI 180
  181 LYTGDFSRQE DRHLMAAEVP PMKPDVLITE STYGTHIHEK REDRENRFTS LVQKIVQQGG 240
  241 RCLIPVFALG RAQELLLILD EFWSQNPDLH EIPIYYASSL AKKCMAVYQT YINAMNDRIR 300
  301 RQIAVNNPFV FRHISNLKGI DHFEDIGPCV IMASPGMMQS GLSRELFESW CTDPKNGVII 360
  361 AGYCVEGTLA KAVLSEPEEI TTLSGQKLPL NMSVDYISFS AHTDYQQTSE FIRLLKPTHV 420
  421 VLVHGEQNEM SRLKLALQRE YEADASTDIK FYNPRNTHAV DLYFR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 102.0
Match: 2i7tA
Description: No description for 2i7tA was found.

Predicted Domain #2
Region A:
Residues: [466-684]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEKTAKVMGS LAAKNSEVGS KLSGVLVKRD FKYHLLAPSD LGKYTDMSMS VVTQRQSIPW  60
   61 GSSLSTLELL LDRIGAGCVE VLEAERKLRV FGCIELTVEQ KIIVMEWQAT HVNDVYADAV 120
  121 LACIMQSELG GTNLKGATKQ TKSEDSRFRE CLIETLQDTF GDNCVPKMFE GDLLPVTVSG 180
  181 KRAEINLETL AISCAEDDVL RQMLNTTVQK LHQTLVSAL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle