YRC Public Data Repository - Protein Structure Prediction

Protein:	CG7695-PA
Organism:	Drosophila melanogaster
Length:	145 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG7695-PA.

Description	E-value	Query Range	Subject Range
AGRIN_RAT - Agrin OS=Rattus norvegicus GN=Agrn PE=1 SV=2	139.0	[0..4]	[139..359]
AGRN_CHICK, AGRI... - (P31696) Agrin precursor, Agrin OS=Gallus gallus GN=AGRN PE=1 SV=2	135.0	[0..3]	[140..465]
AGRN - agrin gi\|168278433 - gi\|168278433\|dbj\|BAG11096.1\| agrin precursor [synthetic construct]	135.0	[0..5]	[140..465]
gi\|42490751 - gi\|42490751\|ref\|NP_067617.2\| agrin [Mus musculus]	133.0	[0..4]	[139..298]
gi\|76637785 - gi\|76637785\|ref\|XP_604151.2\| PREDICTED: similar to agrin [Bos taurus]	132.0	[0..4]	[139..569]

Back

Predicted Domain #1

Region A:
Residues: [1-145]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHGSSQLTLT LALAFMLICL GCNHALAQDE LFRCSVQYKC SDVKELVWAM SDERCHVFHN  60
   61 DCLLKVEQCA RKNSGRSELI ETTREICKPS CTKECPDIYD PVCAQIFQEE YLTFSNECEM 120
  121 RNYICTNERP YSFISVGECV EQPVG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	13.09691
Match:	2p6aD
Description:	No description for 2p6aD was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits