YRC Public Data Repository - Protein Structure Prediction

Protein:	FBpp0306265, FBp...
Organism:	Drosophila melanogaster
Length:	259 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0306265, FBp....

Description	E-value	Query Range	Subject Range
gi\|1835260 - gi\|1835260\|emb\|CAA99990.1\| mitotic cyclin [Sesbania rostrata]	235.0	[0..1]	[258..186]
gi\|7438501, gi\|4... - pir\|\|T10526 cyclin B1c-ll - yellow lupine, gi\|4884728\|gb\|AAD31790.1\|AF126107_1 mitotic cyclin B1-3 [...	232.0	[0..1]	[258..190]
CCNB1_SOYBN - G2/mitotic-specific cyclin S13-6 OS=Glycine max PE=2 SV=1	230.0	[0..1]	[258..192]
CCB21_ORYSJ - Cyclin-B2-1 OS=Oryza sativa subsp. japonica GN=CYCB2-1 PE=1 SV=2	227.0	[0..1]	[259..155]
CCB21_ORYSI - Cyclin-B2-1 OS=Oryza sativa subsp. indica GN=CYCB2-1 PE=1 SV=1	227.0	[0..1]	[259..155]
gi\|1752809 - gi\|1752809\|dbj\|BAA14010.1\| cyclin A [Asterina pectinifera]	226.0	[0..2]	[254..193]
gi\|6331704 - gi\|6331704\|dbj\|BAA86629.1\| cyclin [Oryza sativa]	224.0	[0..1]	[259..155]
gi\|84579363 - gi\|84579363\|dbj\|BAE72070.1\| Cyclin B1-2 [Daucus carota]	222.0	[0..1]	[258..198]

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Predicted Domain #1

Region A:
Residues: [1-259]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNVLDVMSM QQHVELNKAQ TMKPIDYRKM NKPGVVPMYI FECAAKLKMK PLTAACAAIV  60
   61 FHRFFREVKA SDYDEFLIAA GSLYLAGKIK EDESVKIRDV INVAYCTLNR GNDPVDLNDE 120
  121 YWSMRDAIVQ AELLITRTLC FDLNIDLAHK YLLHYMKTLQ DWVGTEVWNS VPIAKAAASY 180
  181 LQDFHHSANI LKYKPTHVAI GCLSLALQTY GIQVPLTDES DESAMWYKPL VKDFTRENQW 240
  241 EIIENVIEVY KNEGFLNAT

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	49.522879
Match:	2g9xB
Description:	No description for 2g9xB was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits