| Protein: | FBpp0304482, FBp... |
| Organism: | Drosophila melanogaster |
| Length: | 586 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0304482, FBp....
| Description | E-value | Query Range |
Subject Range |
|
|
304.0 | [0..51] | [345..1] |
|
Region A: Residues: [1-406] |
1 11 21 31 41 51
| | | | | |
1 MAALEHPDAM LPYSKLLSTA LTVASGNSNS SDGTLLLIQT SAAPGGDVMA TGAGAGKLGV 60
61 PSMNSYLVSM AWPKSLAVAV FLVIILVTVV GNTLVILAVL TTRRLRTVTN CFVMNLAITD 120
121 WLVGTCVMPP SVVLYITGTW RFGWILCDIW ISLDILLCSG SILSLCAISL DRYLAVTQPL 180
181 TYSKKRRSKR LALLMILVVW ITALSITCPP YLGWYEVGRH QAEFVDCRYN QNKGYVVFSA 240
241 MGSFFIPLTV MLYVYVKIGY VLTSRRQRIV RDAYSERTAD YDVDGDNFIS ESEHYHCTPT 300
301 KWLPNRKSRW RFNSLHDPPP SAATNAAAKG HQSSVKCSKC SKCSSATGTA GAGAGAGVVD 360
361 KTLTFKHQPT FYELVEVSRL SSLIHCSAIS CKYGGPCMHS TPSGMH
|
| Detection Method: |  |
| Confidence: | 40.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [407-460] |
1 11 21 31 41 51
| | | | | |
1 YVGTEASFSD TCLGGNVSNN TTTTTTNTVA LETNEKLEAE AKQKQQQQRS SFDH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [461-586] |
1 11 21 31 41 51
| | | | | |
1 HHPHAHHHGS HGQQSHHNHH HRMPMRVSTT KRDSKTAKTL TIVMGGLIAC WLPFFVYYLL 60
61 IPFLPRPAVL EDLMFGFTWI GWVNCAINPF IYAFYNPDFR TAFWRLTCRP ICKQKRPPNH 120
121 LAMFRG
|
| Detection Method: | |
| Confidence: | 4.79 |
| Match: | 1f88A |
| Description: | Rhodopsin |
| Matching Structure (courtesy of the PDB): |
|
