YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: pxt-PB
Organism: Drosophila melanogaster
Length: 809 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pxt-PB.

Description E-value Query
Range
Subject
Range
gi|23171577, gi|... - gi|74947832|sp|Q9VEG6.2|PERC_DROME RecName: Full=Chorion peroxidase; AltName: Full=Peroxinectin-rela...
887.0 [0..1] [809..1]

Back

Predicted Domain #1
Region A:
Residues: [1-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRILFILLL LIVTQLSELQ AAAFSVRQNR FDEVPDLQTP APLATSTESS KKPEKATSGL  60
   61 LKKCLPCSDG IRCVPQIQCP AHVRMESHEK PQICDLPAGK FGYCCETGQN HTAPKPETSP 120
  121 KERRSGFPTI LSPAVLDEAR RNFEHLMHGV AQIPVRRGFP DFAHGLVFHS TAKDDLHNFA 180
  181 ISNSAIEQVM TTQLFGKKEQ VPVEDFITN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [210-809]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NVPIKFTETP LAHHCQPPPV CGNIRSVYRS MDGTCNNPEP QRSLWGAAGQ PMERMLPPAY  60
   61 EDGIWTPRAH SSDGTPLLGA RKISRTLLSD VDRPHPKYNL MVMQFGQVLA HDISQTSSIR 120
  121 LEDGSLVQCC SPEGKVALSP QQSHFACMPI HVEPDDEFFS AFGVRCLNFV RLSLVPSPDC 180
  181 QLSYGKQLTK VTHFVDASPV YGSSDEASRS LRAFRGGRLR MMNDFGRDLL PLTNDKKACP 240
  241 SEEAGKSCFH SGDGRTNQII SLITLQILLA REHNRVAGAL HELNPSASDE TLFQEARRIV 300
  301 IAEMQHITYN EFLPIIIGPQ QMKRFRLVPL HQGYSHDYNV NVNPAITNEF SGAAYRMGHS 360
  361 SVDGKFQIRQ EHGRIDEVVN IPDVMFNPSR MRKREFYDDM LRTLYSQPMQ QVDSSISQGL 420
  421 SRFLFRGDNP FGLDLAAINI QRGRDQGLRS YNDYLELMGA PKLHSFEQFP IEIAQKLSRV 480
  481 YRTPDDIDLW VGGLLEKAVE GGVVGVTFAE IIADQFARFK QGDRYYYEYD NGINPGAFNP 540
  541 LQLQEIRKVT LARLLCDNSD RLTLQAVPLA AFVRADHPGN QMIGCDDPNL PSVNLEAWRA 600
  601 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 156.0
Match: 2ikcA
Description: No description for 2ikcA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle