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View Structure Prediction Details

Protein: beat-IIa-PA, FBp...
Organism: Drosophila melanogaster
Length: 431 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for beat-IIa-PA, FBp....

Description E-value Query
Range
Subject
Range
gi|47214649 - gi|47214649|emb|CAG05169.1| unnamed protein product [Tetraodon nigroviridis]
257.0 [0..4] [431..656]

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Predicted Domain #1
Region A:
Residues: [1-431]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLELQLCGDL SAGDLSEIPK MGHQRATDTG HRQIRSHRKS DCRTFPARCL LLLLGVLLLS  60
   61 MELVECALRN VNLIIEPPAV RRGQHVVLRC MYDLDGAPLY SAKFYRGQLE FYRYTPGEFP 120
  121 NTKVFPFPGI HVDVSSSNAT QVLLRNVGFG LSGNFSCEVT ADAPLFSTAT AVDTMQVVEL 180
  181 PEKRPQVFTE HTRYEPGDVL RANCSTPPSR PRAELTFTIN NMVITHVDTE YIRTIDNLIA 240
  241 TRISLKMQLQ GIHFSSVNPA IYNNVYGLNS VYGHGGPVYA PNSNPGGLLL RCSAQIGDLY 300
  301 QEYKEIELGT PQKDPVPARV TLSSDTSLKN FFSSYFSTSA SAASRLLPGV YMAPLIMAML 360
  361 ASLFRLIEAA FEPCDASSQD PQSQTGHSME HSKERREPKE RPALVSSCSV SKASRQQLAW 420
  421 PGSRTESLRL A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.69897
Match: 1e07A
Description: Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data
Matching Structure (courtesy of the PDB):

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