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View Structure Prediction Details

Protein: kuk-PB, FBpp0297...
Organism: Drosophila melanogaster
Length: 570 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for kuk-PB, FBpp0297....

Description E-value Query
Range
Subject
Range
gi|39579415, gi|... - gi|39579415|emb|CAE56721.1| Hypothetical protein CBG24508 [Caenorhabditis briggsae], gi|187040086|em...
231.0 [0..1] [555..3]

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Predicted Domain #1
Region A:
Residues: [1-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSKMASNTS GGGGTTSGTG TGRRLPLSLS GGSTVTRLQQ SSGSNGRSNS PQNGNKKITE  60
   61 SFLPVKKSNQ PRTTSTGSTG SSQNGVSKPT NGKDKSQNGS STGKDQKVEK SKDKLPEKKA 120
  121 KEVGAENKDK DGAAEMTDME VVVENKQKEV VSENK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [156-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QNEVVSENKE VVSENKEVVS ENKEVASEKK VVVAEVPSDK DDNGETKKDD ATVESTAPAS  60
   61 QTPADAAVII DEVVFIPDLS TPTKDRKSTR KSGSQQKSPI SKASNASPVQ KIKTEAVSSS 120
  121 TSGSLTPQED VDMEPLQVDA SPIRSVHGNL NAVPTATSTP GRSLFSFRGS NKQSTEVELA 180
  181 AQTSSSPAGT PARTFAQISG RRSIRPIDSL TPSKIGTYRC GNSDLDTSNC TNAS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [390-570]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNATVGSEIP NSSSFSFSFF GRGRKRERTP PPLTASQSTS DLGHDVDMSP PKRARFDLFS  60
   61 LNLASPFSLL RSRFSKATIG TPTRLRLEPN SSGVEEQHLN TSTTGVPEEV DVEEEQPAED 120
  121 VTVGQEAGAE EIPAKKDVED KNVNGQDGDK ESSDGENIDP VVEVADVAAV AAEGRSICSI 180
  181 M

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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Created and Maintained by: Michael Riffle