YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG4009-PA
Organism: Drosophila melanogaster
Length: 623 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4009-PA.

Description E-value Query
Range
Subject
Range
PXDN_MOUSE - Peroxidasin homolog OS=Mus musculus GN=Pxdn PE=2 SV=1
631.0 [0..2] [620..634]

Back

Predicted Domain #1
Region A:
Residues: [1-623]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVFLVVLSV LSVAVATKCP YSAMEPSLSR SKRSSFDIRP GVSDGSLDAL IKEFMPKYNG  60
   61 NNVHNSWAEP SASQQPLRCG VPPRNCLNDT RNLHYRTLDG SCNNLLYPEF GIAVSRYRRL 120
  121 LPPRQVEQAP NARLISLSLY GEQTRNDRFR TMAAMQWGQF VAHDISQLST QGAPQDCCAE 180
  181 PRHPRCLPIN LPRGGPIAYH TGKTCLHFAR SVSDADAICP KVEEPQPEKL TVATAYLDLS 240
  241 SIYGNNPSQN RKVRLFKGGL LKTSYTNGQH WLPVSQNENG ECGAKSECYI VPDIRNRFSP 300
  301 TIALLQTLLV REHNRLAENL ALINPDHSDE RIFQEARKIN IAQFQKITYY DWLPLFVGRT 360
  361 YTYLNGLIYP VEPTEYVNDY DETVNPAAYA EFSAAAFRYA HTQIPGWFSL VAPNRRSNRT 420
  421 MRLSDFLDRT ETIRLLDTSD NFDALLRGLA TQLHKRSDGN IDREIKHYFN RKEFEEYGSD 480
  481 LKSIDIQRAR DFGLASYNDV REFCGLRRAV DWADFAHEIP GEKISLLRRL YATPDDVELG 540
  541 VGGTLEYHVP DALFGPTLLC VIGKQFLNTR RGDRFFFERE NEGGFSRAQL AEIRKVSLSS 600
  601 LFCSNANYLH LIQPNVFVFP NSQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 152.0
Match: 2e9eA
Description: No description for 2e9eA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle