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View Structure Prediction Details

Protein: decay-PA
Organism: Drosophila melanogaster
Length: 308 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for decay-PA.

Description E-value Query
Range
Subject
Range
CASP3_PANTR - Caspase-3 OS=Pan troglodytes GN=CASP3 PE=2 SV=1
302.0 [0..13] [303..1]

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Predicted Domain #1
Region A:
Residues: [1-308]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDTDFSLFG QKNKHKKDKA DATKIAHTPT SELDLKRIII SRPTNEDTYE NCARAGIALI  60
   61 LNHKDVKGQK QRVGTERDRD DMEATLQGFG FDVRTFDDLT FSEINDTLKE VAREDHSQND 120
  121 CFVLAVMSHG TEGKVYAKDM SYPVERLWNP FLGDNCKTLK NKPKLFFIQA CRGANLEKAV 180
  181 EFSSFAVMTR ELVPEPAAAV QPITYAIPST ADILVFYSTF DKFFSFRNVD DGSWFIQSLC 240
  241 RVLDQAAANE AATPEGVELL RLLTAVNRKV AYEYQSNTKN EALNQMKEMP NFMSTLTKTF 300
  301 QLRVKPKT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 81.30103
Match: 1cp3A
Description: Apopain (caspase-3, cpp32)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle