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View Structure Prediction Details

Protein: CSN5-PA
Organism: Drosophila melanogaster
Length: 327 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSN5-PA.

Description E-value Query
Range
Subject
Range
gi|4732109 - gi|4732109|gb|AAD28608.1|AF129083_1 COP9 signalosome subunit 5 CSN5 [Drosophila melanogaster]
347.0 [0..1] [327..1]

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Predicted Domain #1
Region A:
Residues: [1-199]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSDAAQKTW ELENNIQTLP SCDEIFRYDA EQQRQIIDAK PWEKDPHFFK DIKISALALL  60
   61 KMVMHARSGG TLEVMGLMLG KVEDNTMIVM DAFALPVEGT ETRVNAQAQA YEYMTAYMEA 120
  121 AKEVGRMEHA VGWYHSHPGY GCWLSGIDVS TQMLNQTYQE PFVAIVVDPV RTVSAGKVCL 180
  181 GAFRTYPKGY KPPNEEPSE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.522879
Match: 2o95A
Description: No description for 2o95A was found.

Predicted Domain #2
Region A:
Residues: [200-327]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YQTIPLNKIE DFGVHCKQYY PLEISYFKSA LDRRLLDSLW NKYWVNTLGS SGLLTNTEYT  60
   61 TGQIMDLSEK LEQSENFLGR GTDVNEKRSE DKLSKATRDC SRSTIELIHG LMAQIVKDKL 120
  121 FNKVGLGK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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