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View Structure Prediction Details

Protein: tara-PA
Organism: Drosophila melanogaster
Length: 916 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tara-PA.

Description E-value Query
Range
Subject
Range
gi|39592304, gi|... - gi|39592304|emb|CAE75525.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae], gi|187020927|em...
gi|157762282 - gi|157762282|ref|XP_001673483.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae AF16]
340.0 [0..5] [915..1027]

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Predicted Domain #1
Region A:
Residues: [1-916]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMWTESNVN SAMGLQATAA TKRKHELTFD SKDANTTYTG NCAPPPVKAN KWAISNNNYL  60
   61 ESLEEQQQQQ QSPSEPAVES NNNHIVLEAS MDALKPTEPS ISNGHEVTTA VAAMKSQAEV 120
  121 PLPPTASAAI PEDSIARLEV VTSAVPCEPW TSNGPTTPSA VAGPAASAEP VDCISKLQAV 180
  181 AVPSDPWGSI ATRSTLATTL LSADELDDDD DDFEDDYEEE ESIIPTYCPM RYHPFVPHPH 240
  241 PHSHQLPSHP HQQQPQQLSQ QQPHPQQQQL AQQQQQHPQQ QRSYAPGYGS RQPNYYSEPF 300
  301 PQQNCSRTGG PQHMTQSPPT PQQARGFAPP QWATAGSSPA NPSSGAQQFY EPTNGGAYAP 360
  361 PAAPQQTIRC AENGKSYLDL GCSSGASGNA GGSPISPPPS SAPVVPFAGL PLHGLPLKRC 420
  421 CDGRPGGWCS ANRSCYKDTR LKIRNLSMFK LSRFRQVSEQ SLYRSVLICN TLKRIDREIE 480
  481 AEAKELHQAA QQHHQQAAAA AAAAAAAAAQ AAQYHPAYQQ QQQQQQSPPA PLHPHTQQQM 540
  541 DYAPVLNCAR LANMDHYQQL SFQPQHQQQQ QPSQPHSYHE RLDSQPAYRG AAAGAGSFAT 600
  601 QPSNCDTSAG ASSSNTSGNS NNSSATAASS NSSLHPYDHY PFRESQSGRA TPFPACPTTT 660
  661 AAAAAASAAA AASSGGAATT LSSNISSSPA SSSTSSNTTS STVISSSSGN TVSSNGTTPV 720
  721 APTASSSNCD TSDSGYADDD STRSINWSSV LSLSSQSALD PLNNNDLFSI LPSAATPTAV 780
  781 PVSVPASSSS SSSGSTLAFS GSFTTVQASG GSSSSCGSSS TTATFTTLST ISSATHSLTS 840
  841 SYVSSISSNV SAGANTWEYG FLDMEFGLGS EFTELVPSCK LSSEDLFKSG LGGQVVTASR 900
  901 LHDNELEHPA HIMVGS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.154902
Match: 1y0fA
Description: No description for 1y0fA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle