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View Structure Prediction Details

Protein: FBpp0311436, CG3...
Organism: Drosophila melanogaster
Length: 222 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0311436, CG3....

Description E-value Query
Range
Subject
Range
gi|50745638 - gi|50745638|ref|XP_420179.1| PREDICTED: similar to Nuclear pore glycoprotein p62 (62 kDa nucleoporin...
245.0 [0..4] [202..403]

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Predicted Domain #1
Region A:
Residues: [1-222]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCEPNLSDPS TFLYLDMLAD ILMQDSLEME SDFNTKLKFL KEQEQICLDN AKNALPIDDT  60
   61 LRSVKCTMLR VEMELHENEI NLIQAEKAVT KLEQSYPSPE SLAGQVFPLA STTYQDLLSM 120
  121 LMSSKKTVDH CNQIKEEVAT YNEQISAKVP SVNLVTKLID YHNNTLESME KNIEKLKSQV 180
  181 TQVQKEFEQL YNEHARQFNA PFPCKKVKEL KPKDTCGVRL RM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.09691
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle