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View Structure Prediction Details

Protein: Sap47-PF
Organism: Drosophila melanogaster
Length: 351 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sap47-PF.

Description E-value Query
Range
Subject
Range
gi|113461768, gi... - gi|113461768|ref|YP_719837.1| large adhesin [Haemophilus somnus 129PT], gi|112823811|gb|ABI25900.1| ...
285.0 [0..3] [272..1504]

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Predicted Domain #1
Region A:
Residues: [1-243]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSGLTNQFT SLVGAVKGGA GDEDVPAPTG DAPAAAPAAS TSVEATASSA VDPEAAAAAG  60
   61 GEGLEGEEAG KSGWLGSAKG WLGNASIPSM PAMPSMPSMP AMPAMPSIPS IPGLRKGAGA 120
  121 DGAEGAEGAV AGEGGAAASG AVSGGEDDDK SRYISATEGA DSHPASGGGT PTGDEGQIGQ 180
  181 VTTKVTQQAK HFGSFLSSAI SKAGSKIKET VKDNTILDSF NKEQEAFIKG QGGVGNGAAP 240
  241 WIG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.221849
Match: 1y0fB
Description: No description for 1y0fB was found.

Predicted Domain #2
Region A:
Residues: [244-351]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HANEAKIKEE ILGLSQDRRN FVRAPPAGVD FEFSYDTAYP TAIAIMAEDK ALETMRFELV  60
   61 PKIITEENFW RNYFYRVSLI IQAAELGTLG ADGVGQASSG EDALAFNY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.39794
Match: 1x3aA
Description: Solution structure of the BSD domain of human Synapse associated protein 1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle