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View Structure Prediction Details

Protein: Pbp45-PA
Organism: Drosophila melanogaster
Length: 363 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Pbp45-PA.

Description E-value Query
Range
Subject
Range
gi|114653425 - gi|114653425|ref|XP_001168611.1| PREDICTED: small nuclear RNA activating complex, polypeptide 1, 43k...
333.0 [0..1] [319..1]

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Predicted Domain #1
Region A:
Residues: [1-109]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELNIFDDCW ELVQRFQRLV NDGENCEFEV FCRCWRELQL QHLFTAQTNH TEVIATTLAA  60
   61 LHVAKRLSCS RRTTGDVFPA SRAQRIGGFF LLYVIYYKQP THNFIKIEV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [110-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPRTWQELTD YALDLRKDSP ERKDTHQIAY MLWRLTQEQA FRFTALDYCQ GLDNLVDYDR  60
   61 VETVAGAKEQ RQSALMQKQQ RANGVSLTYE LEGLRALDQA SQPLCELEAA YNAQKKQLAA 120
  121 GHEHALPPSQ IFGHLREVFA DIQSVLGARK STPDENCTTT STGNQLEVRQ RVRNKAMYGV 180
  181 EEREPQNQAD ELEVQLEVNE TYQRRMSSAT VFQRELPADV QQEYEMIEFS DDEEMEVGES 240
  241 EEVTEEELKA ILDT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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