YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|24647258, gi|...
Organism: Drosophila melanogaster
Length: 139 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24647258, gi|....

Description E-value Query
Range
Subject
Range
gi|62901838 - gi|62901838|gb|AAY18870.1| p21-Arc [synthetic construct]
253.0 [0..8] [139..56]

Back

Predicted Domain #1
Region A:
Residues: [1-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVILNPYATC YLNSQTMFYH FQSDVDRVLI YVTLYITECL KKLNRSTSKA QGQQDMYSLA  60
   61 ISKFDIPGDA GFPLNAVYAK PQTAQDADLM RQYLLQLRHE TGNRVLEKVF NTEDGKPNKW 120
  121 WTCFAKKKFM EKSLAGPGQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.39794
Match: 1k8kE
Description: Arp2/3 complex 21 kDa subunit ARPC3
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle