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View Structure Prediction Details

Protein: FBpp0306142, pxb-PB
Organism: Drosophila melanogaster
Length: 636 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0306142, pxb-PB.

Description E-value Query
Range
Subject
Range
TCNA_TRYCR - Sialidase OS=Trypanosoma cruzi GN=TCNA PE=2 SV=1
218.0 [0..128] [633..601]

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Predicted Domain #1
Region A:
Residues: [1-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWKMLDMMEL SEAELFMFDC DDCSGTPLAP PPQFLIPPPP RPPALAEFTV VPQDCNEEQL  60
   61 AQQQWESDVC QAMPILDASL YSSQSLATSA MIAVFSLLLV LIVLISSLFV WKNKRKVQNL 120
  121 LPCKTPTRGP LNGAMPLG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [139-281]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGTLGSAHHH HHHGMYEDPD AHLGHHRPLV MHRHHHHQQL AHHHHYQQHH SELLQGKSIH  60
   61 YPSGYPMTRS PPFLVSSSPG PDPYRSNDNV YEELGPGRVD SDGESEPPLH SDDDFAEDEL 120
  121 SLPGECSFQK ETNLPAAAGA TPY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [282-480]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HERAAGSSSS GTGVAGVAGA TGSVATSASL PQAVQERHSV LSSGSSMGQD TSTATASSAS  60
   61 NNNHELASGS NNRRTGRTRQ SRSSQDQDLN NSTSTADIAD LAPLYDNRSN LMSLGYVARS 120
  121 TAPQFYNTLE HEVERRNRIN AQLSKAPVPP LSTIYRERIR YPHASQQYPS SVASGLMAAT 180
  181 MRARTQPRVL DRRLAPHQH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [481-636]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QHHRIHAAPM AQEPSYCYAE PMYNANYYYE SAGGARPYAS TLLPTAADYR HPYGDSSFGS  60
   61 DSGYSHHTPA SSIGRQDYDV AEPQVLTQPK PSKLSSALNF SWNRNSRSKG TSGGAIAKTS 120
  121 GNSSNSSATS PNNNSSACST VTSQLENNNT ASLSPA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle