| Protein: | CG6125-PA |
| Organism: | Drosophila melanogaster |
| Length: | 640 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6125-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
377.0 | [0..1] | [640..3] |
|
Region A: Residues: [1-230] |
1 11 21 31 41 51
| | | | | |
1 MRWPRKHTFG LWPKRNGRNR SSGEATGGQP QATVATIYDP GCEEKEKYTA QNGDDYYGQA 60
61 HTVDLDVASK YSKPKEAHWL VRRIFFLSWI TSYDREQAFA DLIAGITLGL TIIPQSIAYA 120
121 ALAGLSSEYG LYSAFIGSII YVFFGTIPQV SIGPTSLMAI LTLQFCADKP VQVVIVLAFL 180
181 AGLVELAMGV FQLGFIVSFI PAPVTKAFTS GTALIVVFAQ IKNLLGVRIK
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [231-310] |
1 11 21 31 41 51
| | | | | |
1 GFPSIGDFFT NIRPTDAAMG ISCMVVLLSL RLLSQVNFKQ DTPVTRRLKK ILWYISISRN 60
61 ALVVFFTGLL VFIWVKKSSI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [311-515] |
1 11 21 31 41 51
| | | | | |
1 EAVPFALSSK VSSAMPTIKL PPFAFEYQNR TYVFTDILHE LGSGIVVVPI VAVLANVAIA 60
61 KAFVKDGNLD ASQEMLTLGL CNIAGSFFSA MPTCGAFTRS AVSQASGVRT PMAGIYTGLI 120
121 VLSALSILTP YFQYIPKASL SAVLIAAVIF MIDLAPVKEL WQTNKKDFFS WVGSFIICLV 180
181 AGVELGLLFG IVLSMVFILL RLGNP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [516-640] |
1 11 21 31 41 51
| | | | | |
1 KFEVTLKQHE STYYVHIVPQ SDVYYTGVDA LRSELRGACR LYHNDFPVVL DCARFMQFDA 60
61 TFSEMLISVA KEMASHDVLL ILQNMSLKVQ QMLPVMGNVR FCQEDSQLSS HLQVEKEAPV 120
121 VEAKL
|
| Detection Method: | |
| Confidence: | 7.09691 |
| Match: | 1sboA |
| Description: | Solution Structure of putative anti sigma factor antagonist from Thermotoga maritima (TM1442) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.97991551312897 | bayes_pls_golite062009 |
| protein binding | 1.39062728142841 | bayes_pls_golite062009 |
