| Protein: | CG5038-PA |
| Organism: | Drosophila melanogaster |
| Length: | 705 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5038-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
588.0 | [0..2] | [701..281] |
|
Region A: Residues: [1-181] |
1 11 21 31 41 51
| | | | | |
1 MLDLVHKATL HSMVCQAILV LICLLCYGCG GLSGAKFVFD DTVAIVKNRD VNSLPTNWTA 60
61 IFTHDFWGAS LLSSDSHKSF RPLTTLMFHC EYALLGLSAA HMKFLNLLLH CVNTLLMWRL 120
121 IRSLYVPEVS TARWAILSAA LFAAHPIHTE AVSGVVGRAE LMFGMIHLLC LLLTVANTGR 180
181 L
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [182-326] |
1 11 21 31 41 51
| | | | | |
1 GPQTGGLIML LTAVGMLFKE SAVTIPMSCV LLDYFQNGYY HLRFKDQWSL LRTRISYLFY 60
61 LLGTLGLLTA RLWWQDFETP TFKEVDNPVA HNEHVLTRGL SQQYLLVMNI WLMLCPHWLC 120
121 YDWALGCVKL VTNIWDLRLQ GVIGF
|
| Detection Method: | |
| Confidence: | 39.283997 |
| Match: | PF08409.2 |
| Description: | No description for PF08409.2 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [327-705] |
1 11 21 31 41 51
| | | | | |
1 YSIVLVALMN FRRLPGMMLA LGLMIVPFLP ASGIICVGFV IAERTLYVPS IGFCLLSIYG 60
61 FLYWYDSSTE NTHWRTALRI LLMLLFSVMM VRTRQRATDW LNEEQLFKSA LQVCPDNAKV 120
121 HYNIARLATD MGNNTKAFQH YHRAIELYPN YESALMNLGN LYREHGQLST AEEYIRLALQ 180
181 AYPAFPAAWM NLGIVQSAQG KYDKALASYE KALKYRANFA VCYYNMGNLY LEQKRYAEAL 240
241 HHWQHAVALN PRQPKAWANI LTMLDNKGLQ DDALRISNQA LQHLPNDVSI LFIRANVLGK 300
301 LKHYTEAEAI YKRVIELEPH NTLYHTNLGV LYHRWDKTQE AIEAYRTAIS ISAARATTAR 360
361 ENLSKLLKRL EREAQVMQR
|
| Detection Method: | |
| Confidence: | 72.39794 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.701353349828976 | bayes_pls_golite062009 |
| protein binding | 0.420010637453541 | bayes_pls_golite062009 |
