| Protein: | Cp190-PB, Cp190-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1096 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Cp190-PB, Cp190-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
691.0 | [0..88] | [769..579] |
|
Region A: Residues: [1-135] |
1 11 21 31 41 51
| | | | | |
1 MGEVKSVKVD NWGVFFLQKL QNFFNKTDYC DLTLQFRDNS QLKVHRLVLS ACTDYFNVLE 60
61 QTCEIVDDAL IMPNEFQADV VVPIVNFMYT GTLEFELKMY GKLLRTAKEM NMTVLLKLLE 120
121 AHRRTMENVN RQQRP
|
| Detection Method: |  |
| Confidence: | 24.69897 |
| Match: | 1r28A |
| Description: | Crystal Structure of the B-Cell Lymphoma 6 (BCL6) BTB domain to 2.2 Angstrom |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [136-267] |
1 11 21 31 41 51
| | | | | |
1 PSPKGIRRRT VGQPSSGLPQ QRVLGPSPQS RNVATPIAQR ANTQRGSTGN TMSRTSGGSN 60
61 RSPYGDSSNV KQEPTSPFEQ LRKGYNNNKR PAQTSLLSPP SKKPSLEEVK EFAEQQRMRK 120
121 QIAAEYGDND PE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [268-464] |
1 11 21 31 41 51
| | | | | |
1 YDGGMLYDDV HAGDDDDDDM PPQPSTSKQQ SPQGTQTQLE HGSTTIILKQ DSPSQTPTII 60
61 VKDSSNAKLN HTKIIAEVLR QYPHIVKGHK NIKLKIMPNT PAAPTEKSAP ATVKPPANQS 120
121 SATTSPHKKL HVSFKADKST PLITAQQKAA SSQQKSGTSQ TTGNQGTGAN PPANTAAAQK 180
181 RRIDSKTMHA LIAQGAE
|
| Detection Method: | |
| Confidence: | 47.69897 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [465-692] |
1 11 21 31 41 51
| | | | | |
1 NTTGPWLCLR CGVNGRPISI PSYRGFRRHL INTHKETIDP ALCEHCGWRS VNNRELHFHM 60
61 YMEHQTKSLL YTFAECALCN QSYRTKGELE AHINEVHTDD NKQQCIYCNK VFEQELQLYR 120
121 HMKSYHKEQA LEDGIIDETD EEFLGSQDEE EEAEGDEEQE PEQTGKVRIL SDISLPATSA 180
181 ITVQQAQQEQ LQEEDVEQVQ QEVKFVGADG NEVELTDEQR KEILSQLN
|
| Detection Method: | |
| Confidence: | 19.69897 |
| Match: | 1tf6A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [693-756] |
1 11 21 31 41 51
| | | | | |
1 QQQAGATAGG VVMVLSEPEA EHVKQETDEK SLAGTEEEYD DSQIYSELGA ADSVESAKKN 60
61 IADE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [757-1096] |
1 11 21 31 41 51
| | | | | |
1 SKESIDNLEW AENLIAESEE QSNKEPKSDK PRDDISEKLK ELTGDWTEDE NDDDVDDKPA 60
61 TAELASELAN KDPEPTVHEE EDDIDLALQS LHKGPEEATE EKASEESVTS ADDAVDAVPN 120
121 INSQPEKMDV DSEAADEKAS KAEVQIKKEA ELENDQEEFI KEDSPIPHSD SVAELREAVT 180
181 ASEGEDDVHL EADNIRKELL DELIAEAEKP DQEKDIVQSE ENATTEALDR SVTDEDDLVP 240
241 PTQVSTEQME IDEPAAEKAA ENNEDTRTAD EKEAVEDKPN QTQDVTTAEK PTLESAKAGD 300
301 EATSGEAASV DKVKSLISEW GDDDEDEDEN GVSAAAKEEL
|
| Detection Method: | |
| Confidence: | 5.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
