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View Structure Prediction Details

Protein: mRpS10-PA
Organism: Drosophila melanogaster
Length: 163 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mRpS10-PA.

Description E-value Query
Range
Subject
Range
gi|25012207 - gi|25012207|gb|AAN71219.1| GM25447p [Drosophila melanogaster]
155.0 [0..3] [163..18]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQAIKTLRW TQPMRALSTV NTSSGVQGNL SPAAPAPEPD KLYSKLEIEL RGIDPAVLKS  60
   61 YTWFATTAAE HLGIEKGKCW SPRKAHHERM TLLKSVHIYK KHRVQYEVRT HFRYMNFHKL 120
  121 TGSTLDTFLE YIERNLPEGV ALQASRTELQ EIPEHLRQPP EQV

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Detection Method: PSI-BLAST
Confidence: 29.522879
Match: 1p6gJ
Description: 70S ribosome functional complex
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
structural constituent of ribosome 9.82905885280588 bayes_pls_golite062009
structural molecule activity 9.25405593567362 bayes_pls_golite062009
binding 0.795193544824207 bayes_pls_golite062009
RNA binding 0.60427462690745 bayes_pls_golite062009
nucleic acid binding 0.593237783262061 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle