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View Structure Prediction Details

Protein: CG7262-PA
Organism: Drosophila melanogaster
Length: 796 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG7262-PA.

Description E-value Query
Range
Subject
Range
gi|114662650 - gi|114662650|ref|XP_510982.2| PREDICTED: nucleoporin 93kDa [Pan troglodytes]
1013.0 [0..1] [796..103]

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Predicted Domain #1
Region A:
Residues: [1-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLNTLLQRA QNLNNDAKAE CELPAVERTL QQVLRATTEL HSRVTQTGCK EIQAHILLGS  60
   61 KGVDLPKLNQ KLEALSARKT FEPLDVKADT DVRTFLKNER ENAILSVIED TKKNISDSAN 120
  121 KQRWASMNKV WNEEKTRLLD ALIAPSQNFI 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [151-796]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLQRLPEPTI VNPLCQPRSC LDPLELVYAQ ELRHYNELLL KSSHRPNLVQ KFAHLSQSFG  60
   61 DCRLTDMWTL LACVTQISEP LRSDPIKSRQ QRPEFVTYAK SYLERRYRVF MCSQVGGSYA 120
  121 NNSYQLVVAY VNHRFRAQQT IGLVDTVREI PLWPLVYYGL RCGAVKVAVE FLREAGSSHD 180
  181 EFAQLVADRN AGETNSKIEN QLRLQYANKI RNSTDAYKKA VYCILLGCDV NEVHGEVAKT 240
  241 IDDFLWMRLA MIQPGDADNY GKLQSMILEQ YGEKYFNARQ QPYLYFETLA LTGQFEAAIE 300
  301 FLARQDENRA HAVHMAIALF ELGLLGSARS VSQPLLSIDI KDPQPLRRLN LTRLIRQYVQ 360
  361 RFERTDTSEA LHYYYTLRCL KDSKGRNMFM ACVCDLVVDS GVFDTTIFDL IFGKRQSSDQ 420
  421 NDVNSGLFRQ FECPEFDTRT MAAQVGDELA ALGNFEMSAR LYEMAGKYNL AVKHICILMA 480
  481 QVVHLPTLGG SLRERLGQDA QRFNQLLASD SIDVEPKMKS SFVLLQDLLI FFNFYHDGKF 540
  541 NAALDLLRQT QLVPNTLDDV DVVLGNVKQL SGEVIKVLPD VIVAAMEIAQ KQYKQLKAGS 600
  601 GSSLEQTQMQ QLRQRAKALS NMAATMPYRL PNDTNKRLIE LELDMH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 165.0
Match: 2qx5A
Description: No description for 2qx5A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle