YRC Public Data Repository - Protein Structure Prediction

Protein:	CG8066-PA, FBpp0...
Organism:	Drosophila melanogaster
Length:	104 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8066-PA, FBpp0....

Description	E-value	Query Range	Subject Range
gi\|92868415 - gi\|92868415\|gb\|ABE78420.1\| Proteinase inhibitor I25, cystatin [Medicago truncatula]	128.0	[0..1]	[98..38]
gi\|809608, gi\|10... - gi\|809608\|emb\|CAA60610.1\| cysteine proteinase inhibitor [Zea mays], pir\|\|S54828 cysteine proteinase ...	128.0	[0..2]	[98..35]
gi\|1586085, gi\|1... - gi\|1586085\|prf\|\|2203261A Cys protease inhibitor, pir\|\|JH0269 cystatin - avocado	126.0	[0..5]	[99..1]
gi\|66866421 - gi\|66866421\|gb\|AAY57859.1\| cysteine proteinase inhibitor [Zea mays subsp. parviglumis]	125.0	[0..2]	[97..35]
gi\|18874516 - gi\|18874516\|gb\|AAL79831.1\|AF469485_1 cystatin [Sandersonia aurantiaca]	124.0	[0..1]	[101..1]

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Predicted Domain #1

Region A:
Residues: [1-104]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNVPIVGGI SQLEGNERKE ALELLDATLA QLANGDGPSY KALNVTSVTG QVVAGRLNTY  60
   61 EVQLDNGSEI KQGTVQIWSR AWLKENGTNI KIKFPGEDEL DHTW

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	27.39794
Match:	1eqkA
Description:	Phytocystatin
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits