| Protein: | FBpp0300511 |
| Organism: | Drosophila melanogaster |
| Length: | 511 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0300511.
| Description | E-value | Query Range |
Subject Range |
|
|
297.0 | [0..33] | [468..489] |
|
Region A: Residues: [1-118] |
1 11 21 31 41 51
| | | | | |
1 MYTPHPFGFL IILVPMTNAM RAIAAIAAGV GSVAATVATS TTSSISSSTT IINTSSATTI 60
61 GGNHTSGSTG FSTNSTLLDA DHLPLQLTTA KVDLDIEIDI QLLTNGYDGT TLTSFYNE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [119-511] |
1 11 21 31 41 51
| | | | | |
1 SSWTNASEMD TIVGEEPEPL SLVSIVVVGI FLSVLIFLSV AGNILVCLAI YTERSLRRIG 60
61 NLFLASLAIA DLFVASLVMT FAGVNDLLGY WIFGAQFCDT WVAFDVMCST ASILNLCAIS 120
121 MDRYIHIKDP LRYGRWVTRR VAVITIAAIW LLAAFVSFVP ISLGIHRPDQ PLIFEDNGKK 180
181 YPTCALDLTP TYAVVSSCIS FYFPCVVMIG IYCRLYCYAQ KHVKSIKAVT RPGEVAEKQR 240
241 YKSIRRPKNQ PKKFKVRNLH THSSPYHVSD HKAAVTVGVI MGVFLICWVP FFCVNITAAF 300
301 CKTCIGGQTF KILTWLGYSN SAFNPIIYSI FNKEFRDAFK RILTMRNPWC CAQDVGNIHP 360
361 RNSDRFITDY AAKNVVVMNS GRSSAELEQV SAI
|
| Detection Method: | |
| Confidence: | 41.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
