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View Structure Prediction Details

Protein: CG9297-PA
Organism: Drosophila melanogaster
Length: 930 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9297-PA.

Description E-value Query
Range
Subject
Range
gi|109105844 - gi|109105844|ref|XP_001118235.1| PREDICTED: EH-domain containing 1 [Macaca mulatta]
622.0 [0..498] [927..176]

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Predicted Domain #1
Region A:
Residues: [1-351]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRLTIWFLL GLTLIAVSNN VGFVNADVGP SESECRPYIE KAIHELKTDG VRDGSGELQS  60
   61 DQPRGDDDDD DDDEDAKSAN DLDGDGIPDD EDDDIDGDGI PNEKDDDIDG DGIPNDEDDD 120
  121 IDGDGIPNED DDDIDGDGVP NSKDEDIDGD GVPNSKDEDI DGDGKANHED DDLDGDGTPN 180
  181 HEDEDLDGDG VPNEEDDDLD GDGKINHEDE DLDGDGVKND EDEDLDGDGK VNHEDEDLDG 240
  241 DGVKNEKDDD LDGDGTNNSQ DEDLDGDGVP NEKDDDLDGD GILNEHDGDV DGDGVPNEHD 300
  301 HKDSGENADD DDDDDDEDDK EAVKKRSKRE VDAAPVLDIE APPSPAEEFP V

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.30103
Match: 1yo8A
Description: Strucuture of the C-terminal domain of human thrombospondin-2
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [352-497]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EEEIVKEASA EEEAEVEAVK EEEPEQEAVQ EPEPEPVVEP EAEVQPEPVQ QEEEKAESAE  60
   61 AKEEEKPAPV EEAEAEEESV QPEAAPKEPE AVQEEAQEDE PQTDGAQDAA DDDDDTKPED 120
  121 ELLWEGHIPE NRRSRQHITE LLQLDE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.55
Match: 2j63A
Description: No description for 2j63A was found.

Predicted Domain #3
Region A:
Residues: [498-930]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EFNAREKATD NVAEIILRDI KRIYENAVKP LETLYKYRDL SNRHFSDPEI FSKPLILFMG  60
   61 PWSGGKSSIL NYLTDNEYTP NSLRTGAEPS PAYFNILMWG NETEVLDGTQ LAADYTFAGL 120
  121 QKFGQGLEER LRGLKMKSKI LEKVNIVEIP GILEVRKQVS RVFPFNDACQ WFIDRADIIF 180
  181 LVYDPAKLDV GPETEAILDQ LKGREYQTRI ILNKADTVKP EELLRVQGAL IWNISPLMSS 240
  241 AQPPLMYTTS LWTHPYQDGA PARLLLAQER AFLRDLRTAI DKRIEHKIAS ARRFAVRVRN 300
  301 HAKMVDCYLN TFNNHKTLFG NKKRIADDII DHPQNYHIYE GLSTLTNISR YDLPDPEVYR 360
  361 DFFRLNPLYE FKKLRDTCTY FRGCPITKLD LAIAYELPEL AGKYKKMSEA ALAAIEAQQQ 420
  421 DGTIGQAEPK RTS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 166.0
Match: 2qptA
Description: No description for 2qptA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle