YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: Cht5-PA
Organism: Drosophila melanogaster
Length: 595 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Cht5-PA.

Description E-value Query
Range
Subject
Range
gi|37594527, gi|... - gi|37594527|gb|AAQ94193.1| Chitinase [Helicoverpa armigera], gi|37499415|gb|AAQ91786.1| Chitinase [H...
425.0 [0..4] [579..2]

Back

Predicted Domain #1
Region A:
Residues: [1-501]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRYIPLLLL GVLCSWPAAT VASDQASRIV CYFSNWAVYR TGIGRYGLED VPADLCTHII  60
   61 YSFIGVNDKS WDVLVIDPEL DVDQGGFSKF TQLKKSNPNV KLEIAVGGWA EGGSKYSQMV 120
  121 AVRDRRQSFI RSVVRFMKQY NFDGFDLDWE YPGATDRGGN YGDKDKFLYF VEELRRAFDR 180
  181 EGRGWEITMA VPVAKFRLNE GYHVPELCEA LDAIHAMTYD LRGNWAGFAD VHSPLYKRKH 240
  241 DQYAYEKLNV NDGLALWEEM GCPANKLVVG VPFYGRTFTL SNSNKNYNMG TYINKEAGGG 300
  301 APGPYTNASG FLAYYEICTE VMDKSKGWTV EWDDAGMVPY TYKDTQWVGY ENEASIQIKM 360
  361 DFIKQRGYAG AMTWAIDMDD FHGMCGRKNG LTQILYDNMK NYRVPEPTRQ TTPRPEWAKP 420
  421 PATPPNPDEG AVVAPTTSTT KRPKPKPKPT SSPLSPTSAP GPVPTVGSST PKPTTKKPKK 480
  481 PKKTTTTTTT TPAPEKSTEE P

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 94.154902
Match: 1wawA
Description: Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
chitinase activity 6.40555694403866 bayes_pls_golite062009
imaginal disc growth factor activity 3.9608908661313 bayes_pls_golite062009
growth factor activity 2.18932950777991 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 1.91170236789651 bayes_pls_golite062009
receptor binding 1.89435893935497 bayes_pls_golite062009
amylase activity 1.38959979746158 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 1.34796838721403 bayes_pls_golite062009
chitin binding 1.29046765706168 bayes_pls_golite062009
binding 1.1885466730171 bayes_pls_golite062009
carbohydrate binding 0.80333288291596 bayes_pls_golite062009
glucosidase activity 0.766503513427695 bayes_pls_golite062009
protein binding 0.690517649847952 bayes_pls_golite062009
catalytic activity 0.534516847146079 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 0.266938437560648 bayes_pls_golite062009
hexosaminidase activity 0.21148675734804 bayes_pls_golite062009
hydrolase activity 0.178746202646272 bayes_pls_golite062009
pattern binding 0.113396113487931 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [502-595]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EEVVYPVDPV EPTDPEQPMG PQFDPNEIDC TNRDFVPHPN CRKYFRCVHG KPVEFECKEG  60
   61 TAFHTVLNVC DWIENSDRYY CSRMKNKEKG NEAH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.154902
Match: 1dqcA
Description: Tachycitin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
chitin binding 4.96064653069284 bayes_pls_golite062009
pattern binding 2.46061159867708 bayes_pls_golite062009
polysaccharide binding 2.32066659910214 bayes_pls_golite062009
carbohydrate binding 1.87164656128563 bayes_pls_golite062009
binding 1.39728566369812 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle