YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG14367-PA
Organism: Drosophila melanogaster
Length: 310 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG14367-PA.

Description E-value Query
Range
Subject
Range
gi|58382110, gi|... - gi|58382110|ref|XP_311688.2| ENSANGP00000000751 [Anopheles gambiae str. PEST], gi|55242569|gb|EAA073...
206.0 [0..1] [310..1]

Back

Predicted Domain #1
Region A:
Residues: [1-310]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVEDSWVFD SLVCFLHGPI WNAPLQTFIE QKSLVFDPNQ QLDENNPDIL QIHEEYKNLV  60
   61 DYMLGSFMEE MQISPEQFEM ACLEGRQQGQ GENPFHFHQV LFQQIWAAND LKIFIRMMTQ 120
  121 RNVELQLQAL DLIEKNQLAP GGVEEGDDRS ADASSDPGDT ASEVEQMIAK TVSDELESPE 180
  181 AALTPEQEPN LELVNDKFQR LNLFFEQEDR VDPSDVVSRQ EYLRQQRDKI VEIKKQTRAK 240
  241 QLQETMSRGT PHAPEGARPS SALVAQQLLE NGGQTKELSM PAPLEAEENA ALQLRRNLAK 300
  301 RLRSEVVEQK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.09691
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle