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View Structure Prediction Details

Protein: CG9813-PB, CG981...
Organism: Drosophila melanogaster
Length: 556 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9813-PB, CG981....

Description E-value Query
Range
Subject
Range
gi|39592304, gi|... - gi|39592304|emb|CAE75525.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae], gi|187020927|em...
gi|157762282 - gi|157762282|ref|XP_001673483.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae AF16]
221.0 [0..1] [510..1097]

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Predicted Domain #1
Region A:
Residues: [1-143]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATRNLLAIL LLASICMTQA YPALLPYIYN PSKRSGDTAF PQIEDDVSEL DQLRNEPGAV  60
   61 MAKRQHDGST ARTTTTTKES VEEVAAVPEP GAQPNANIMP DLERQLEVAT PLISTTTTTS 120
  121 TSATTTTATS KEEGERSQLE EPK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [144-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TQIKTVVEPT AHAKAFYGAA RLAFGQNPEV LPTTTTTSTT TTTTTTTAAP PTETEPEGDS  60
   61 QSPAEQEPEA KQTEPETETA QDVAGEPVEA VDPVGDVAET ELTALNTPKS KQNHHESNKE 120
  121 TIGDIVFDVV ARTTERRSIT PKITAKNAKS FLRSPNGQYS SFDMAQYIFW TGD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [317-424]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETAVVKAVEE LVEGKVITRE SALKFLQDIR LGIEFLQRSY ANRIFPEEVR QNQLKRHSPA  60
   61 ITTPPASTTT TTTTSTTTTT EKPFPAVHES GSESGIERGA AGVLPAKS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [425-556]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FDSFTFWNKL KVLDSEAQQD LNDYDEGRAK IVEYLYNEYS LEEILYKLAK VMFAQSLSHG  60
   61 SDEAQMELQK LTEFLEREGN MGVIPIDLQK KVLRVLLSAL SDTLTEHPEF LPAARVNLAN 120
  121 PFYRLPIHAP SQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle