| Protein: | CG8784-PA |
| Organism: | Drosophila melanogaster |
| Length: | 660 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8784-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
487.0 | [0..1] | [660..1] |
|
Region A: Residues: [1-82] |
1 11 21 31 41 51
| | | | | |
1 MLQGVAITIA NDSNDDGINQ SFMAHVSPSP NQSPSIGVGI GIASSTMANP SESPEMLLLK 60
61 NDKFLTHVAH LLNITTENLS NL
|
| Detection Method: |  |
| Confidence: | 4.39794 |
| Match: | 2jodA |
| Description: | No description for 2jodA was found. |
|
Region A: Residues: [83-419] |
1 11 21 31 41 51
| | | | | |
1 LGSTNGTNAS TMAADSPVDE SLTLRTALTV CYALIFVAGV LGNLITCIVI SRNNFMHTAT 60
61 NFYLFNLAVS DLILLVSGIP QELYNLWYPD MYPFTDAMCI MGSVLSEMAA NATVLTITAF 120
121 TVERYIAICH PFRQHTMSKL SRAIKFIFAI WLAAFLLALP QAMQFSVVYQ NEGYSCTMEN 180
181 DFYAHVFAVS GFIFFGGPMT AICVLYVLIG VKLKRSRLLQ SLPRRTFDAN RGLNAQGRVI 240
241 RMLVAVAVAF FLCWAPFHAQ RLMAVYGLNL INIGISRDAF NDYFRILDYT SGVLYFLSTC 300
301 INPLLYNIMS HKFREAFKIT LTRQFGLARN HHHQQSQ
|
| Detection Method: | |
| Confidence: | 52.522879 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [420-660] |
1 11 21 31 41 51
| | | | | |
1 HHQHNYSALL RQNGSMRLQP ASCSVNNNAL EPYGSYRVVQ FRCRDANHQL SLQDSIRTTT 60
61 TTTTINSNSM AAGNGVGGGA GGGGGGRRLR KQELYGPGPG TAVPHRMLQA QVSQLSSLGD 120
121 ANSLLEAEVV DRHYASGRAK RALLATKSGA LLVTPPQSGD PSEVSQPATR LKLTRVISRR 180
181 DEVANTSTPP FCGSHSLPDP ETCQSASVAG RSSRKFPWRK RRQKTEDPSS EGLTYGSPKS 240
241 Q
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
