| Protein: | CG8795-PA, CG8795-PB |
| Organism: | Drosophila melanogaster |
| Length: | 599 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8795-PA, CG8795-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
427.0 | [0..5] | [599..1] |
|
Region A: Residues: [1-382] |
1 11 21 31 41 51
| | | | | |
1 MAVKMLPTNS SGVLATDLQL FHNEKFLLNL TQVLNISADN LTSLLQGLEP EELLPTVTPM 60
61 TPLSLLATLS VGYALIFIAG VLGNLITCIV ISRNNFMHTA TNFYLFNLAI SDMILLCSGM 120
121 PQDLYNLWHP DNYPFSDSIC ILESVLSETA ANATVLTITA FTVERYIAIC HPFRQHTMSK 180
181 LSRAVKFIFA IWIAALLLAL PQAIQFSVVM QGMGTSCTMK NDFFAHVFAV SGFLFFGGPM 240
241 TAICVLYVLI GVKLKRSRLL QALPRRCYDV NRGISAQTRV IRMLVAVAVA FFICWAPFHA 300
301 QRLMAVYGST SGIESQWFND VFSILDYTSG VLYFLSTCIN PLLYNIMSHK FREAFKVTLA 360
361 RHFGLGGKNQ GRGLPHTYSA LR
|
| Detection Method: |  |
| Confidence: | 55.0 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [383-599] |
1 11 21 31 41 51
| | | | | |
1 RNQTGSLRLH TTDSVRTTMT SMATTTTGLN GSANGSGNGT TTGQSVRLNR VSLDSVQMQG 60
61 QNRSRQDLFD NPRRMLQTQI SQLSSVGDAH SLLEEDLQFP GEPLQRQPTM CSIDELTDDL 120
121 AISRSRLKLT RITRPPGGVT GGVAGGSTTG AAGSGGVSGD ESSGKVRKAK VKVLKSSSPF 180
181 KGLRTKFNWR ARRKGSHKPH EKGATVNGGD TEERAAF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
