YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG32473-PB
Organism: Drosophila melanogaster
Length: 903 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG32473-PB.

Description E-value Query
Range
Subject
Range
CG32473-PC - This gene is referred to in FlyBase by the symbol Dmel\CG32473 (CG32473, FBgn0052473). It is a prote...
784.0 [0..1] [903..123]

Back

Predicted Domain #1
Region A:
Residues: [1-903]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATVAPAVKA ASKVLQNLGF RLPKQIKPSK YRLHLRPDLE RKNYSGNISI SLQVLEPIAF  60
   61 IPVHVKQLNV STVEVKRLDE SGAPLKDITP TLTFAHPEFE YWVTEFEQPL EAGNYSLLLN 120
  121 FTGSLVDRIT GMYQSSYLDK LKNRSRSIIS TKFEPTYARQ AFPCFDEPAL KAQFTITVAR 180
  181 PSGDEYHVLS NMPVASEYVD GDITEVTFAE TVPMSTYLAA FVVSDFQYKE TTVEGTSIAL 240
  241 KVYAPPAQVE KTQYALDTAA GVMAYYINYF NVSYALPKLD LVAIPDFVSG AMENWGLVTF 300
  301 RETALLYDES TSSSVNKQRV AIVVAHELAH QWFGNLVTMN WWNDLWLNEG FASFLEYKGV 360
  361 KQMHPEWDMD NQFVIEELHP VLTIDATLAS HPIVKSIESP AEITEYFDTI TYSKGAALVR 420
  421 MLENLVGEEK LRNATTRYLV RHIYSTATTE DYLTAVEEEE GLEFDVKQIM QTWTEQMGLP 480
  481 VVEVEKSGST YKLTQKRFLA NEDDYAAEAE ASSFNYRWSI PITYTSSINS EVQSLIFNHN 540
  541 DNEATITLPE EASWIKINTN QVGYYRVNYG SEQWAELISA LKNSRETFST ADRAHLLNDA 600
  601 NTLAAAGQLN YSVALDLISY LESEQDYVPW SVGTSALATL RNRVYYTDLY TNYTTYARKL 660
  661 LTPIVEKVTF TVAADHLENR LRIKVLSSAC SLGHESSLQQ AVTLFNQWLA SPETRPNPDI 720
  721 RDVVYYYGLQ QVNTEAAWDQ VWKLYLDESD AQEKLKLMNC LTAVQVPWLL QRYINWAWDE 780
  781 SNVRRQDYFT LLGYISTNPV GQSLVWDYVR ENWEKLVDRF GINERTLGRL IPTITARFST 840
  841 ETKLEEMQQF FAKYPEAGAG TAARQQALEA VKANIKWLAA NKAQVGEWLA NYVQQSSVTN 900
  901 RIQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 127.0
Match: 1z1wA
Description: Crystal structures of the tricorn interacting facor F3 from Thermoplasma acidophilum, a zinc aminopeptidase in three different conformations
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle