YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG32473-PA
Organism: Drosophila melanogaster
Length: 1012 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG32473-PA.

Description E-value Query
Range
Subject
Range
gi|28316911 - gi|28316911|gb|AAO39477.1| RE62048p [Drosophila melanogaster]
849.0 [0..1] [1012..25]

Back

Predicted Domain #1
Region A:
Residues: [1-128]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAWLTVKSV AIFLGLASTA FCVATIVLAV QNADLENDLQ DALDKIDALT VDTTSTSSTS  60
   61 TSTSTTTTTA NPNGPTDDTE PGSTTTPGVG GDTTPSAGTS PGGETSPSSS TGSTTNPIYP 120
  121 TLPTGLPD

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.971
Match: 1q1qA
Description: Crystal structure of human pregnenolone sulfotransferase (SULT2B1a) in the presence of PAP
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [129-1012]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PEKIEWRLPT ELTPIKYKVY YHPDLTTGAC EGTVSIQFQL NAITNLIVLH AKELNVHSIS  60
   61 ILNMMARIRV AIDSINLDES RELLLITLRE VLSMNKAYTL SASFDCDLSS LVGSYISNYT 120
  121 NADGVDRSII STKFEPTYAR QAFPCFDEPA LKAQFTITVA RPSGDEYHVL SNMPVASEYV 180
  181 DGDITEVTFA ETVPMSTYLA AFVVSDFQYK ETTVEGTSIA LKVYAPPAQV EKTQYALDTA 240
  241 AGVMAYYINY FNVSYALPKL DLVAIPDFVS GAMENWGLVT FRETALLYDE STSSSVNKQR 300
  301 VAIVVAHELA HQWFGNLVTM NWWNDLWLNE GFASFLEYKG VKQMHPEWDM DNQFVIEELH 360
  361 PVLTIDATLA SHPIVKSIES PAEITEYFDT ITYSKGAALV RMLENLVGEE KLRNATTRYL 420
  421 VRHIYSTATT EDYLTAVEEE EGLEFDVKQI MQTWTEQMGL PVVEVEKSGS TYKLTQKRFL 480
  481 ANEDDYAAEA EASSFNYRWS IPITYTSSIN SEVQSLIFNH NDNEATITLP EEASWIKINT 540
  541 NQVGYYRVNY GSEQWAELIS ALKNSRETFS TADRAHLLND ANTLAAAGQL NYSVALDLIS 600
  601 YLESEQDYVP WSVGTSALAT LRNRVYYTDL YTNYTTYARK LLTPIVEKVT FTVAADHLEN 660
  661 RLRIKVLSSA CSLGHESSLQ QAVTLFNQWL ASPETRPNPD IRDVVYYYGL QQVNTEAAWD 720
  721 QVWKLYLDES DAQEKLKLMN CLTAVQVPWL LQRYINWAWD ESNVRRQDYF TLLGYISTNP 780
  781 VGQSLVWDYV RENWEKLVDR FGINERTLGR LIPTITARFS TETKLEEMQQ FFAKYPEAGA 840
  841 GTAARQQALE AVKANIKWLA ANKAQVGEWL ANYVQQSSVT NRIQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 134.0
Match: 1z1wA
Description: Crystal structures of the tricorn interacting facor F3 from Thermoplasma acidophilum, a zinc aminopeptidase in three different conformations
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle