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View Structure Prediction Details

Protein: CG8449-PA
Organism: Drosophila melanogaster
Length: 654 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8449-PA.

Description E-value Query
Range
Subject
Range
gi|54638223, gi|... - gi|54638223|gb|EAL27625.1| GA21087-PA [Drosophila pseudoobscura], gi|125774455|ref|XP_001358486.1| G...
286.0 [0..1] [649..1]

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Predicted Domain #1
Region A:
Residues: [1-414]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVWGIEAIT LNGSSARESL EHLPGNGAIR VIPEAGAMNS VERYRQEWQV LLENLDADPE  60
   61 SLRQSAFAGD LKMSKFRSVH WALLLRVLTS EHRSWTSQRL QQRVRYDKFR ADYVRNPHQL 120
  121 AVDCNDDPLS QSTQSVWNQY FSDQDLFAVI RQDVVRTFPG VDFFRKPLVQ NAMVNILFYY 180
  181 AREHPYMCYR QGMHEILAPI IFVVYSDHQS LLHFSELAKT DINPTLLDVL DPAYLEADTY 240
  241 SLFSRLMASV ESYYRVSNLV STPGGHIEQR AESPGDNETS TEAEVIGQLN FIRDKILAKQ 300
  301 DQHLHHYLQK MEIPLHIFGI RWLRLLFGRE FMLLDLLLLW DAIFADSDRF DLPNYILVAM 360
  361 LVHIRDKLLL SDYTTSLTYL MRYPNNVDVH LVLRHALFML NPKQFEYPPN AFTC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.69897
Match: 2qfzA
Description: No description for 2qfzA was found.

Predicted Domain #2
Region A:
Residues: [415-654]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSFANSSADK DVPPPAGQRP RTNSENSSMA TSGSQIDRQI TFMQERNAAD SSALAKLQDT  60
   61 HRVAMDGYLE NSPELLRLEL KNAQTVIKIA RSKLQSYLST VRHHVGKQAN GSEELGRTLD 120
  121 GIEELCSFLD VKFMFPLHQR SAPIDQALEA NEQKQLNTVS KPPKPTASST PANAPAALSA 180
  181 TGGYQMPENA FMHSSMRRLL GELREIELST ITSDEKPGNA VVQNGLPAAE PQQRHRNESS 240
  241 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.09691
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle