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View Structure Prediction Details

Protein: granny-smith-PB
Organism: Drosophila melanogaster
Length: 558 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for granny-smith-PB.

Description E-value Query
Range
Subject
Range
gi|6942155 - gi|6942155|gb|AAF32329.1|AF218812_1 putative cytoplasmic aminopeptidase [Drosophila melanogaster]
569.0 [0..1] [558..1]

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Predicted Domain #1
Region A:
Residues: [1-558]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLLCVQAI RNHLARTYSS ARFKKMATDV KFNESLGCSD PQTHPVLIIG QLRHLNLLKF  60
   61 SHLESKLSPR VTEETFLNAV ACLHPAPTDK VSLYLDVATV AALPLKASRH NTASRAHAIT 120
  121 RLVKNHVLNV SEESVVLVCE RENLFASACA VVRAFPLYSR KTGNLLASSQ PKLNLGCGDG 180
  181 NANSGRNVVN VEFVLINKDG CIESEPLTDD ELNCLNETTR AIRMTARIVD MPCNEMNVDH 240
  241 FIQEVEDVGR ELCITPKVIR GEELLEQGFG GIYGVGKAAA VPPALVVLSH EPKGAQETIA 300
  301 LVGKGIVYDT GGLSIKAKTG MPGMKRDCGG AAAILGTFYA AVQCGFRDNL HAVFCLAENS 360
  361 VGPNATRPDD IHTLYSGRTV EINNTDAEGR LVLADGVCYA NKDLKANIIL DMATLTGAQG 420
  421 VATGKYHGAI LTNSETWEAK SLQAGRKSGD LLAPIIYCPE LHFSEFASAI ADMKNSVADR 480
  481 QNAQSSCAGL FIAAHLGFDY PGIWMHVDMA TPVHCGERAT GYGVSLLLTL FGGHTDSKLL 540
  541 QSIASTDEEP PSKRWCRD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 105.0
Match: 2hb6A
Description: No description for 2hb6A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle