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View Structure Prediction Details

Protein: desat1-PE, desat...
Organism: Drosophila melanogaster
Length: 383 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for desat1-PE, desat....

Description E-value Query
Range
Subject
Range
gi|1621653 - gi|1621653|gb|AAB17283.1| fatty acid desaturase [Drosophila melanogaster]
316.0 [0..1] [383..1]

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Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPNAQAGAQ SISDSLIAAA SAAADAGQSP TKLQEDSTGV LFECDVETTD GGLVKDITVM  60
   61 KKAEKRRLKL VWRNIIAFGY LHLAALYGAY LMVTSAKWQT CILAYFLYVI SGLGITAG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [119-298]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AHRLWAHRSY KAKWPLRVIL VIFNTIAFQD AAYHWARDHR VHHKYSETDA DPHNATRGFF  60
   61 FSHVGWLLCK KHPEVKAKGK GVDLSDLRAD PILMFQKKYY MILMPIACFI IPTVVPMYAW 120
  121 GESFMNAWFV ATMFRWCFIL NVTWLVNSAA HKFGGRPYDK FINPSENISV AILAFGEGWH 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [299-383]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NYHHVFPWDY KTAEFGKYSL NFTTAFIDFF AKIGWAYDLK TVSTDIIKKR VKRTGDGTHA  60
   61 TWGWGDVDQP KEEIEDAVIT HKKSE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle