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View Structure Prediction Details

Protein: Scgbeta-PA
Organism: Drosophila melanogaster
Length: 352 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Scgbeta-PA.

Description E-value Query
Range
Subject
Range
gi|54637768|gb|E... - GA19038-PA [Drosophila pseudoobscura], GA19038 [Drosophila pseudoobscura pseudoobscura]
gi|125773549, gi... - gi|54637768|gb|EAL27170.1| GA19038 [Drosophila pseudoobscura pseudoobscura], gi|125773549|ref|XP_001...
425.0 [0..2] [352..1]

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Predicted Domain #1
Region A:
Residues: [1-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMHTFENTFI RGPSPSYSDD ANSENALSVT LPIGGVVPDL DFCRDDSKTD TGDYFDEKYN  60
   61 SDSCSRLHPG HQGRNTFAFW TIVVLLLVLT VGNLLLTLTI VGVLRLGKGV QGMEVIPEVD 120
  121 LVKFYGTTDL ERVQTNSIGQ IHGFSDVPVT ISSDAGDGEG GVHVRVFRNG NGAASERDRI 180
  181 VL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [183-352]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NREGILVQAT NLFEVKDPVD KQPIFTTHRP QYNIPGGVEA LQAKVVSASG IVSPIDESLV  60
   61 LESDGRMAIR GSEGVYFDGA SVDMQAEHHI LINSTQGATI LEAGTGIFLD MDRIPIVSSE 120
  121 LGLRTGSVQY KICVCMPHGT LFRIAIPRVH NGPKITCAHF SGKDDPCEIN 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle