YRC Public Data Repository - Protein Structure Prediction

Protein:	Pglym87-PA
Organism:	Drosophila melanogaster
Length:	292 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Pglym87-PA.

Description	E-value	Query Range	Subject Range
gi\|21483344 - gi\|21483344\|gb\|AAM52647.1\| GH28416p [Drosophila melanogaster]	323.0	[0..1]	[292..18]
gi\|47223880 - gi\|47223880\|emb\|CAG06057.1\| unnamed protein product [Tetraodon nigroviridis]	291.0	[0..39]	[292..1]
gi\|91092672 - gi\|91092672\|ref\|XP_971117.1\| PREDICTED: similar to putative phosphoglycerate mutase [Tribolium casta...	289.0	[0..39]	[292..1]
gi\|50603688, gi\|... - gi\|50603688\|gb\|AAH77484.1\| MGC82549 protein [Xenopus laevis], gi\|148233078\|ref\|NP_001086809.1\| MGC82...	288.0	[0..39]	[292..1]
gi\|44890340, gi\|... - gi\|44890340\|gb\|AAH66680.1\| Phosphoglycerate mutase 1a [Danio rerio], gi\|38488700\|ref\|NP_942099.1\| bi...	288.0	[0..39]	[292..1]
gi\|58396165, gi\|... - gi\|58396165\|ref\|XP_321710.2\| AGAP001420-PA [Anopheles gambiae str. PEST], gi\|55233926\|gb\|EAA01768.2\|... AGAP001420-PA - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase\|protein_coding\|2R:4739393:4740249:-1\|gene:...	287.0	[0..38]	[292..1]
gi\|194101986, gi... - gi\|195144118\|ref\|XP_002013043.1\| GL23914 [Drosophila persimilis], gi\|194101986\|gb\|EDW24029.1\| GL2391... gi\|54638036\|gb\|E... - GA14392-PA [Drosophila pseudoobscura], GA14392 [Drosophila pseudoobscura pseudoobscura] gi\|125774083, gi... - gi\|54638036\|gb\|EAL27438.1\| GA14392 [Drosophila pseudoobscura pseudoobscura], gi\|125774083\|ref\|XP_001...	286.0	[0..38]	[292..1]

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Predicted Domain #1

Region A:
Residues: [1-292]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLALARNSWC GQLLCRVANI EARCPFSKSS SGGKQAEKKG KYRIVMVRHG ESEWNQKNLF  60
   61 CGWFDAKLSE KGQQEACAAG KALKDAKIEF DVAHTSVLTR AQETLRAALK SSEHKKIPVC 120
  121 TTWRLNERHY GGLTGLNKAE TAKKFGEEKV KIWRRSFDTP PPPMEKDHEY YACIVEDPRY 180
  181 KDQLKPEEFP KSESLKLTIE RTLPYWNEVI VPQIKDGMRV LIAAHGNSLR GVVKHLECIS 240
  241 DKDIMSLNLP TGIPFVYELD ESLKPLATLK FLGDPETVKK AMESVANQGK AK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	74.0
Match:	1yfkA
Description:	Crystal structure of human B type phosphoglycerate mutase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits