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View Structure Prediction Details

Protein: CG12201-PB
Organism: Drosophila melanogaster
Length: 319 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG12201-PB.

Description E-value Query
Range
Subject
Range
gi|40741388, gi|... - gi|67903596|ref|XP_682054.1| hypothetical protein AN8785.2 [Aspergillus nidulans FGSC A4], ref|XP_41...
287.0 [0..15] [309..345]

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Predicted Domain #1
Region A:
Residues: [1-319]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEQVEQKNQ EQKKPQKFNV FPKIINGGVA GIIGVACVYP LDMVKTRLQN QTIGPNGERM  60
   61 YTSIADCFRK TIASEGYFGM YRGSAVNIVL ITPEKAIKLT ANDFFRYHLA SDDGVIPLSR 120
  121 ATLAGGLAGL FQIVVTTPME LLKIQMQDAG RVAAADRAAG REVKTITALG LTKTLLRERG 180
  181 IFGLYKGVGA TGVRDITFSM VYFPLMAWIN DQGPRKSDGS GEAVFYWSLI AGLLSGMTSA 240
  241 FMVTPFDVVK TRLQADGEKK FKGIMDCVNR TLKEEGISAF FKGGLCRIMV LAPLFGIAQM 300
  301 FYFLGVGEKI LGIERTKSV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.045757
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle