| Protein: | glo-PA, glo-PB |
| Organism: | Drosophila melanogaster |
| Length: | 586 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for glo-PA, glo-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
229.0 | [0..1] | [454..125] |
|
Region A: Residues: [1-235] |
1 11 21 31 41 51
| | | | | |
1 MSNADVQFNY GQQGNGDNFN DDSNQQQDED DQYNEDGGGK IENVGESPKF VRLRGLPWSA 60
61 THKEILDFLE NVNVTNGSAG IHLVTSRVDG KNTGEAYVEV ASQEDVEEAR KLNKASMGHR 120
121 YIEVFTATPK EAKEAMRKIS GHGTAFVVKL RGLPYAVTEQ QIEEFFSGLD IKTDREGILF 180
181 VMDRRGRATG EAFVQFESQD DTEQALGRNR EKIGHRYIEI FRSSIAEMKR ATGAG
|
| Detection Method: |  |
| Confidence: | 53.522879 |
| Match: | 1up1A |
| Description: | UP1, THE TWO RNA-RECOGNITION MOTIF DOMAIN OF HNRNP A1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [236-449] |
1 11 21 31 41 51
| | | | | |
1 GGVGGRPGPY DIRDRGANRG GNDFGGGRND WGNNGNFGVG ANNMLGFNNL PSLMNSGNFG 60
61 NNQGGNNGNF GNNSGPSNFG NFGGGNNGGN SGNFGNDSGN SGNFGNFGNN GGGNFGGNNN 120
121 GGGGFNSGNN FNSPGGVNNF GNNGGSNFGG NGGGGFNNGG NFVSSSGVGN FGPIGGGRNN 180
181 NNGNFGNSGF GNFGGNNNVG SNFGGGNNGG GGGF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [450-586] |
1 11 21 31 41 51
| | | | | |
1 NNGSNFGGGN SMGGGGNFGP IGGGRGNDIE YYTIHMRGLP YTSFENDVFK FFEPIRPANV 60
61 RINYNKKGLH SGTADAYFDT YEDSQVAMKR HREQMGSRYI ELFYDGKTRG LNGGEHGGGN 120
121 GGGGMGNNGG GNFSRRI
|
| Detection Method: | |
| Confidence: | 12.69897 |
| Match: | 2hgnA |
| Description: | No description for 2hgnA was found. |
