| Protein: | CG31116-PD |
| Organism: | Drosophila melanogaster |
| Length: | 1193 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG31116-PD.
| Description | E-value | Query Range |
Subject Range |
|
|
881.0 | [0..14] | [1193..3] |
|
Region A: Residues: [1-147] |
1 11 21 31 41 51
| | | | | |
1 MVYFGDRQRD RNRDRSNQKV ERIIHDEEFG EENVELVDSE WADFEKFICQ LRKRRNSAMS 60
61 MEEELRHVQR HPKIKSHAFY PCPPPAENAR DSDSSDDDDP IGYIDTLMYG RYTKDLGEFA 120
121 KDEARKLKIL EKRRKQEDKQ RNKELLG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [148-568] |
1 11 21 31 41 51
| | | | | |
1 KHSTRAKRVS SWIWRHTVAR LGEDWVFLAL LGIIMALLSF IMDKGISICT NARIWLYRDL 60
61 TSQPFVQYIA WVSLPVCLIL FSAGFVHLIA PQSIGSGIPE MKTILRGVQL KEYLTFKTLV 120
121 AKVIGLTATL GSGMPLGKEG PFVHIASIVA QLLSKLVTSF QGIYENESRN SEMLAAACAV 180
181 GVGACFAAPV GGVLFSIEVT TTYFAVRNYW RGFFAAVCGA TVFRLLAVWF QNADTVRALF 240
241 LTNFTTEFPF DPQELFVFAL IGLVCGLGGA SYVWVHRRYV LFMRSNKRMN KFLQKNRFLY 300
301 PGFLALLVSS ISFPLGTGQF LAGELSTHEQ VTQLFSNFTW SRDDLTVEQA AVVTHWMTSY 360
361 TSVFGNLVIY TLFTFVVSII ASTIPVPSGM FIPVFKIGAG FGRLVGEFMA VTFPHGVRYG 420
421 G
|
| Detection Method: | |
| Confidence: | 119.0 |
| Match: | 1bccC |
| Description: | Mitochondrial cytochrome b subunit, C-terminal domain; Mitochondrial cytochrome b subunit, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [569-647] |
1 11 21 31 41 51
| | | | | |
1 RLSPIMPGGY AVVGAAAFSG SVTHTVSVAV IIFEMTGQIT HVVPVMIAVL VANAVAALLQ 60
61 PSIYDSIILI KKLPYLPDL
|
| Detection Method: | |
| Confidence: | 2.53 |
| Match: | 1kplA |
| Description: | Clc chloride channel |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [648-877] |
1 11 21 31 41 51
| | | | | |
1 LPSSSGMYSI FVEDFMVRDV KYIWHGISYQ KLKEVLKLNK TLRSLPLVDS PDNMILLGSV 60
61 QRYELIKMIE KHIGREKRME VAQKWQKEAQ ERALEEEKKK QEVELKMRRP SRFEVLPAPD 120
121 ILSLRQIAND EMLPPKKRAE TMHGSLAPRK SILKKTNSFN LKTYAQPMGH SPSITPYTTI 180
181 TGNSEFRIRS AFEAIFKKST TLQDVQPDPE TGSLSPAASN HEVEVPRTPS
|
| Detection Method: | |
| Confidence: | 20.69897 |
| Match: | 2d4zA |
| Description: | Crystal structure of the cytoplasmic domain of the chloride channel ClC-0 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [878-974] |
1 11 21 31 41 51
| | | | | |
1 TPGVSKKVQL PAQSNWDFVT DQIMLQVNPI STESNKMPAE KDFTDKALSN NGDSSKQSPS 60
61 IKFKANKVAD VNRSPQTAKR CSKIRFANEV GVNGSPT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [975-1114] |
1 11 21 31 41 51
| | | | | |
1 RTKCKIKPEN VLGYSIEDVD ETTNPESLAE SIQKPKSVRL PRERVIDMSP EDQKQWELEE 60
61 MLKPIDLQKA NVHIDPSPFQ LVERTSILKV HSLFSMVGIN HAYVTKIGRL VGVVGLKELR 120
121 KAIEDINSNS FVPPTRDEDA
|
| Detection Method: | |
| Confidence: | 17.045757 |
| Match: | 2pfiA |
| Description: | No description for 2pfiA was found. |
|
Region A: Residues: [1115-1193] |
1 11 21 31 41 51
| | | | | |
1 DEKPAVEKPL LSTNSSDKAV DMTVTSMDSA LSNSENCSDI EMEHIKHTDK GTVSLTMPPQ 60
61 ESKQSPSADK SNTENGNHA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
