| Protein: | mus309-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1487 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mus309-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
905.0 | [0..1] | [1487..1] |
|
Region A: Residues: [1-79] |
1 11 21 31 41 51
| | | | | |
1 MSKKPVAQRK QLTLSSFIGL DGNSQSQPKS RAASVRSKPP AVYNPIFLDA SSSDDETTEI 60
61 SSQSNNGTIA TKKSSRDPR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [80-233] |
1 11 21 31 41 51
| | | | | |
1 TAKLKKHTYL DLSVSPLAKL SAKKYARDSP KKPTSLDLSV SPLAELLAKK SDRDSPKKPV 60
61 QNENSYTYRG LSESPVENKS IGDTLRKPPQ KERKTSIVWL SDSPEKKVTQ NERKILDSPL 120
121 QRFSFEDFPN KENGNRHHLL TLPDSPPPPQ PVKK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [234-485] |
1 11 21 31 41 51
| | | | | |
1 PEKTMWQNET KTIQDKDSPA NPLVSNNLAS ISTLLDSSRA PNTYKGSSRN LFEDSPEKSG 60
61 SGEQGYKLGS AKENEIPTKP ATASLERNSV TSSPSPAAPL KPRYSVAFDN SLADYLKDLA 120
121 QNDNFSIDPN KQNTETLKST LGFFRNTYVE LMEKYCSLID QIPAMHFNEI AGFQPNTFLK 180
181 LKVMRQKFKA RTQLVQNSLD KKESQLKAEQ EALEKEEIEM QAEQAQQTVL SSSSPEKSRP 240
241 IMPLPKVQEI KD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [486-669] |
1 11 21 31 41 51
| | | | | |
1 EKIPNRNQLI HDLCGEPDNF SPPSSPRDTQ LIPKRQQLIN DLCGEPDDFS PPSKQNDPHL 60
61 LRKCEELVHD LCEEPDDYLA QSMMLDGDLE EEQLNGPTQG TTTSGMDDDE DDLEGLLAEI 120
121 EDEHQKMQGR RSEFNGYSYK ELEAVKVKEK HKETPINISL DDDGFPEYDE AMFEQMHSQA 180
181 AANK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [670-1277] |
1 11 21 31 41 51
| | | | | |
1 SRVSSAGPST SKSVVPTKQT SALHSQKLSG NFHANVHNDG ITGEFDGQKF EHSTRLMHGL 60
61 SYSFGLKSFR PNQLQVINAT LLGNDCFVLM PTGGGKSLCY QLPAILTEGV TIVISPLKSL 120
121 IFDQINKLAS LDICAKSLSG EQKMADVMAI YRDLESQPPM VKLLYVTPEK ISSSARFQDT 180
181 LDTLNSNNYI SRFVIDEAHC VSQWGHDFRP DYKKLGVLKK RFPNVPTIAL TATATPRVRL 240
241 DILAQLNLKN CKWFLSSFNR SNLRYRVLPK KGVSTLDDIS RYIRSKPQHF SGIIYCLSRK 300
301 ECDETSKKMC KDGVRAVSYH AGLTDTDRES RQKDWLTGKM RVICATVAFG MGIDKPDVRF 360
361 VLHYSLPKSI EGYYQEAGRA GRDGDVADCI LYYNYSDMLR IKKMLDSDKA LQYNVKKIHV 420
421 DNLYRIVGYC ENLTDCRRAQ QLDYFGEHFT SEQCLENRET ACDNCINKRA YKAVDALEHA 480
481 RKAARAVKDL CSGRSRFTLL HIADVLKGSK IKKIIDFNHH KTPHHGVLKD WDKNDVHRLL 540
541 RKMVIDGFLR EDLIFTNDFP QAYLYLGNNI SKLMEGTPNF EFAVTKNAKE AKAAVGSVSD 600
601 GATSSTAD
|
| Detection Method: | |
| Confidence: | 121.0 |
| Match: | 2v1xA |
| Description: | No description for 2v1xA was found. |
|
Region A: Residues: [1278-1360] |
1 11 21 31 41 51
| | | | | |
1 GQSGMREIHE RCYTDLLDLC RTIASQRNVT MASIMNIQAL KSMAETLPIT EKDMCSIPHV 60
61 TKANFDKYGA KLLEITSNYA SEK
|
| Detection Method: | |
| Confidence: | 22.39794 |
| Match: | 1wudA |
| Description: | E. coli RecQ HRDC domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1361-1487] |
1 11 21 31 41 51
| | | | | |
1 LLMQAVLDEE EEQAAAKQRP STSGWNNESV DWDMAVASQG NANTSGASGF NSFRAGKRKK 60
61 IYKSGASKRY KTSTTSPAAR KTTSARGRGG RAGAKRAESS ASSASGWKSK KTGNSFGFDL 120
121 MPLPGSK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
