Protein: | mus309-PA |
Organism: | Drosophila melanogaster |
Length: | 1487 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mus309-PA.
Description | E-value | Query Range |
Subject Range |
|
905.0 | [0..1] | [1487..1] |
Region A: Residues: [1-79] |
1 11 21 31 41 51 | | | | | | 1 MSKKPVAQRK QLTLSSFIGL DGNSQSQPKS RAASVRSKPP AVYNPIFLDA SSSDDETTEI 60 61 SSQSNNGTIA TKKSSRDPR |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [80-233] |
1 11 21 31 41 51 | | | | | | 1 TAKLKKHTYL DLSVSPLAKL SAKKYARDSP KKPTSLDLSV SPLAELLAKK SDRDSPKKPV 60 61 QNENSYTYRG LSESPVENKS IGDTLRKPPQ KERKTSIVWL SDSPEKKVTQ NERKILDSPL 120 121 QRFSFEDFPN KENGNRHHLL TLPDSPPPPQ PVKK |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [234-485] |
1 11 21 31 41 51 | | | | | | 1 PEKTMWQNET KTIQDKDSPA NPLVSNNLAS ISTLLDSSRA PNTYKGSSRN LFEDSPEKSG 60 61 SGEQGYKLGS AKENEIPTKP ATASLERNSV TSSPSPAAPL KPRYSVAFDN SLADYLKDLA 120 121 QNDNFSIDPN KQNTETLKST LGFFRNTYVE LMEKYCSLID QIPAMHFNEI AGFQPNTFLK 180 181 LKVMRQKFKA RTQLVQNSLD KKESQLKAEQ EALEKEEIEM QAEQAQQTVL SSSSPEKSRP 240 241 IMPLPKVQEI KD |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [486-669] |
1 11 21 31 41 51 | | | | | | 1 EKIPNRNQLI HDLCGEPDNF SPPSSPRDTQ LIPKRQQLIN DLCGEPDDFS PPSKQNDPHL 60 61 LRKCEELVHD LCEEPDDYLA QSMMLDGDLE EEQLNGPTQG TTTSGMDDDE DDLEGLLAEI 120 121 EDEHQKMQGR RSEFNGYSYK ELEAVKVKEK HKETPINISL DDDGFPEYDE AMFEQMHSQA 180 181 AANK |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [670-1277] |
1 11 21 31 41 51 | | | | | | 1 SRVSSAGPST SKSVVPTKQT SALHSQKLSG NFHANVHNDG ITGEFDGQKF EHSTRLMHGL 60 61 SYSFGLKSFR PNQLQVINAT LLGNDCFVLM PTGGGKSLCY QLPAILTEGV TIVISPLKSL 120 121 IFDQINKLAS LDICAKSLSG EQKMADVMAI YRDLESQPPM VKLLYVTPEK ISSSARFQDT 180 181 LDTLNSNNYI SRFVIDEAHC VSQWGHDFRP DYKKLGVLKK RFPNVPTIAL TATATPRVRL 240 241 DILAQLNLKN CKWFLSSFNR SNLRYRVLPK KGVSTLDDIS RYIRSKPQHF SGIIYCLSRK 300 301 ECDETSKKMC KDGVRAVSYH AGLTDTDRES RQKDWLTGKM RVICATVAFG MGIDKPDVRF 360 361 VLHYSLPKSI EGYYQEAGRA GRDGDVADCI LYYNYSDMLR IKKMLDSDKA LQYNVKKIHV 420 421 DNLYRIVGYC ENLTDCRRAQ QLDYFGEHFT SEQCLENRET ACDNCINKRA YKAVDALEHA 480 481 RKAARAVKDL CSGRSRFTLL HIADVLKGSK IKKIIDFNHH KTPHHGVLKD WDKNDVHRLL 540 541 RKMVIDGFLR EDLIFTNDFP QAYLYLGNNI SKLMEGTPNF EFAVTKNAKE AKAAVGSVSD 600 601 GATSSTAD |
Detection Method: | ![]() |
Confidence: | 121.0 |
Match: | 2v1xA |
Description: | No description for 2v1xA was found. |
Region A: Residues: [1278-1360] |
1 11 21 31 41 51 | | | | | | 1 GQSGMREIHE RCYTDLLDLC RTIASQRNVT MASIMNIQAL KSMAETLPIT EKDMCSIPHV 60 61 TKANFDKYGA KLLEITSNYA SEK |
Detection Method: | ![]() |
Confidence: | 22.39794 |
Match: | 1wudA |
Description: | E. coli RecQ HRDC domain |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [1361-1487] |
1 11 21 31 41 51 | | | | | | 1 LLMQAVLDEE EEQAAAKQRP STSGWNNESV DWDMAVASQG NANTSGASGF NSFRAGKRKK 60 61 IYKSGASKRY KTSTTSPAAR KTTSARGRGG RAGAKRAESS ASSASGWKSK KTGNSFGFDL 120 121 MPLPGSK |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.