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View Structure Prediction Details

Protein: gi|24645984, gi|...
Organism: Drosophila melanogaster
Length: 788 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24645984, gi|....

Description E-value Query
Range
Subject
Range
gi|5631308, gi|7... - gi|7305383|ref|NP_038812.1| phosphatidylinositol glycan anchor biosynthesis, class N [Mus musculus],...
535.0 [0..1] [778..1]

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Predicted Domain #1
Region A:
Residues: [1-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDSTRSFVL FQLLLLFAVV LIYLRSTYPG SLEPQEVEHL KEPPPADRLV VLVRDGLSAQ  60
   61 SFLANRCTNV PLLRELFLHQ GLVGISRPET ITYHSISPYI SLFSGFNEDA ASVARGWLGT 120
  121 PASIDSIFDR CKRSFAWTTT ELISRFPKIE RPRELSFETY GEGVTKSCSE MEDFVCRSVQ 180
  181 RFLGGGSRLL LNTTGVIFFI HMTGVEPSCE SLQRIQENVW NVYKSFEKTF PDQRTAYLFT 240
  241 SNLGDPQTKT LMSALL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.0
Match: 2gsnA
Description: No description for 2gsnA was found.

Predicted Domain #2
Region A:
Residues: [257-383]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVPPPVYSRG MLPKGMLNAS LRYEANAMLI NAKQLLAQAR RLRELHPKRM PAFWLSFQMM  60
   61 DNFVKESLAL KKQRRFRALL DYSCNYMPVL IKGMDYFKDY YRHVSITAVS FAGIAWIYCL 120
  121 RCHLTVG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [384-496]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKCRNLIEIQ EVISSKRLVY ARGFHRLLTG VLVIIMMLER IPLVVQAILL IPSLYWRTTL  60
   61 KILGERPKMV CRKSLMSTAL LALICFGGFF RRYILAVGYL GFASYNNREA FKR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [497-608]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RGHQFYLWLL LLLGLTVVSA LPESLGCSQP GALMFSIFLT VLRPLACGVY LNLLTWLSNI  60
   61 PVLLAALEYI LIGWHPWIMY LVSWIYLGFL VLWQRRNLQA SEVFFFDLST LY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [609-788]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TLTCTSYESV VIQMLAMELQ LALRMKLKRN ESIGPKTAAH YILVYSWYSL FIIGSFPAFD  60
   61 DFLDILHETC FGYSPLTYGL VMVLKLILPW LLVLCIMAGN YKSLASYEQQ IFVRLLLMNS 120
  121 AMSLVLLHGI TNVGPWRDIL SRFAEFAVVH VFPLVWLLLW RLTQLKVGSK WMSQLPNELL 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle