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View Structure Prediction Details

Protein: CG6783-PA
Organism: Drosophila melanogaster
Length: 117 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6783-PA.

Description E-value Query
Range
Subject
Range
gi|114589486 - gi|114589486|ref|XP_001158395.1| PREDICTED: similar to Retinol-binding protein I, cellular (Cellular...
155.0 [0..6] [117..82]

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Predicted Domain #1
Region A:
Residues: [1-117]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSLPHHSSF GVGLVTRKMG NSLSPTVEVT LEGDTYTLTT TSTFKTSAIS FKLGVEFDEE  60
   61 TLDGRNVKSI ITLDGNKLTQ EQKGDKPTTI VREFTDNELI TTLTIGNVKC VRVYKAV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.0
Match: 1fdqA
Description: Brain fatty acid binding protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.245084616956573 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle