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View Structure Prediction Details

Protein: sals-PA
Organism: Drosophila melanogaster
Length: 533 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sals-PA.

Description E-value Query
Range
Subject
Range
gi|68388302 - gi|68388302|ref|XP_696268.1| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio]
261.0 [0..1] [530..2331]

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Predicted Domain #1
Region A:
Residues: [1-133]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKEVESGKK LRHVACNDRS QPILTCKSIT KLDDKFIYET EKGNSHNKLL KQIQGGIKLK  60
   61 PTKTNDRSKP VLDGLRKFRR QMTIEEQLQK SQSKINMLSE APSSHALGPG SATALGAGGS 120
  121 RPSIVSAMSI DEE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.69897
Match: 2i1jA
Description: No description for 2i1jA was found.

Predicted Domain #2
Region A:
Residues: [134-463]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPDELDDIDK IRDDLQSTKQ MLALELRNRE AQDRENKKLL AKIRTLETEL EREKSREKNL  60
   61 EYGSNVIVAT MDPTPTAEQT YVNSLKREVE DARKVSKEVE QNYQSTAEQL VEAKTEIEEQ 120
  121 RRQIQLLERK LAAALQATPS TNRPHISNCF AYDDDDYDDC FHYDHYHAAR HQGGGSLDGS 180
  181 RRPSDANFGR DSSPELEPEV SESDPDEPEE KKVERRERRS GKELKILRSK LTKLKVKEEA 240
  241 AKKEKDALKQ AMKKNQSILK EENKKFKKLE KEVQKMAASM KLDEDDVDGE EKDEDEEEAE 300
  301 EEHASEEEEE SDDESEESES EESEAETGSE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.69897
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [464-533]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEPEDSPNSA KKANVEPRVK KHESRFAAMK KCNVLLQANV DNLQDQIVQV RSRATNLQDE  60
   61 LDAVIADLGF 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.2
Match: 1kqlA
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle