YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24645935, gi\|...
Organism:	Drosophila melanogaster
Length:	153 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24645935, gi|....

Description	E-value	Query Range	Subject Range
gi\|66772027 - gi\|66772027\|gb\|AAY55325.1\| IP04468p [Drosophila melanogaster]	239.0	[0..1]	[153..1]
DTD_THEAQ - D-aminoacyl-tRNA deacylase OS=Thermus aquaticus GN=dtd PE=3 SV=2	237.0	[0..1]	[144..1]
DTD_GEOKA - D-aminoacyl-tRNA deacylase OS=Geobacillus kaustophilus (strain HTA426) GN=dtd PE=3 SV=1 DTD_GEOKA - D-tyrosyl-tRNA(Tyr) deacylase OS=Geobacillus kaustophilus GN=dtd PE=3 SV=1	236.0	[0..1]	[144..1]
DTD_BACHD - D-tyrosyl-tRNA(Tyr) deacylase OS=Bacillus halodurans GN=dtd PE=3 SV=1 DTD_BACHD - D-aminoacyl-tRNA deacylase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM...	235.0	[0..1]	[142..1]
DTD_BACCN - D-aminoacyl-tRNA deacylase OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391...	235.0	[0..1]	[142..1]
gi\|47556625, gi\|... - gi\|47566595\|ref\|ZP_00237417.1\| D-tyrosyl-tRNA(tyr) deacylase [Bacillus cereus G9241], gi\|47556625\|gb... gi\|228608376, gi... - gi\|229175080\|ref\|ZP_04302597.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus cereus MM3], gi\|228608376\|gb...	234.0	[0..1]	[142..1]
DTD_BACC1 - D-aminoacyl-tRNA deacylase OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=dtd PE=3 SV=1 gi\|228585036, gi... - gi\|229198533\|ref\|ZP_04325237.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus cereus m1293], gi\|228585036\|... DTD_BACCQ - D-aminoacyl-tRNA deacylase OS=Bacillus cereus (strain Q1) GN=dtd PE=3 SV=1 gi\|229141145, gi... - gi\|229141145\|ref\|ZP_04269686.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus cereus BDRD-ST26], gi\|228642... gi\|229163354, gi... - gi\|229163354\|ref\|ZP_04291306.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus cereus R309803], gi\|22862013... DTD_BACCZ - D-aminoacyl-tRNA deacylase OS=Bacillus cereus (strain ZK / E33L) GN=dtd PE=3 SV=1 DTD_BACC7 - D-aminoacyl-tRNA deacylase OS=Bacillus cereus (strain AH187) GN=dtd PE=3 SV=1 gi\|228935726, gi... - gi\|228935726\|ref\|ZP_04098539.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus thuringiensis serovar andalo... gi\|206745771, gi... - gi\|206976019\|ref\|ZP_03236929.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus cereus H3081.97], gi\|2067457... gi\|228659249, gi... - gi\|229123947\|ref\|ZP_04253139.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus cereus 95/8201], gi\|22865924...	233.0	[0..1]	[142..1]
gi\|206735395, gi... - gi\|206969707\|ref\|ZP_03230661.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus cereus AH1134], gi\|206735395... DTD_BACCR - D-aminoacyl-tRNA deacylase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / ... gi\|228954690, gi... - gi\|228954690\|ref\|ZP_04116713.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus thuringiensis serovar kursta... gi\|228818081, gi... - gi\|228941574\|ref\|ZP_04104122.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus thuringiensis serovar berlin... gi\|228923158, gi... - gi\|228923158\|ref\|ZP_04086449.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus thuringiensis serovar huazho... gi\|228701674, gi... - gi\|229081670\|ref\|ZP_04214165.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus cereus Rock4-2], gi\|22870167... gi\|228981097, gi... - gi\|228981097\|ref\|ZP_04141398.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus thuringiensis Bt407], gi\|228... gi\|228974503, gi... - gi\|228974503\|ref\|ZP_04135070.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus thuringiensis serovar thurin... gi\|228960679, gi... - gi\|228960679\|ref\|ZP_04122323.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus thuringiensis serovar pakist... gi\|228602827, gi... - gi\|229180682\|ref\|ZP_04308022.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus cereus 172560W], gi\|22860282... gi\|228636474, gi... - gi\|229146977\|ref\|ZP_04275339.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus cereus BDRD-ST24], gi\|228636... gi\|228653803, gi... - gi\|229129686\|ref\|ZP_04258654.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus cereus BDRD-Cer4], gi\|228653... gi\|228671634, gi... - gi\|229111878\|ref\|ZP_04241424.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus cereus Rock1-15], gi\|2286716... gi\|228590924, gi... - gi\|229192617\|ref\|ZP_04319578.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus cereus ATCC 10876], gi\|22859...	232.0	[0..1]	[142..1]

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Predicted Domain #1

Region A:
Residues: [1-153]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAVIQRVKA AKVTVLDELV SSIGPGLCVL VGIKASDTAK DVEYLVRKIL ALRLFEEEGK  60
   61 RWQKSVKDLN LELLCVSQFT LYHRLKGNKP DFLAAMKGEE AQELYNQFLD RLGQSYDSTK 120
  121 IKAYMQVHIE NDGPVTINLE SPEQKDTDRE VDK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	58.0
Match:	2okvA
Description:	No description for 2okvA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits