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View Structure Prediction Details

Protein: Ranbp9-PA, FBpp0...
Organism: Drosophila melanogaster
Length: 1018 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ranbp9-PA, FBpp0....

Description E-value Query
Range
Subject
Range
gi|162318534 - gi|162318534|gb|AAI56332.1| Importin 9 [synthetic construct]
IPO9 - importin 9
gi|114571796 - gi|114571796|ref|XP_514097.2| PREDICTED: importin 9 [Pan troglodytes]
ENSCJAT00000010986 - null
486.0 [0..6] [1014..14]

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Predicted Domain #1
Region A:
Residues: [1-909]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLQFQNDCG DSVKQAIIEE LQNLLSSDTG VLQQTEKRIK QLEYTEGYGV YLSEIIMNQA  60
   61 HELPLRQIAI VMLTRYVENH WTDDDDVKRK ANGCMASEQA KRTIRNILPN GLYDPNSKIR 120
  121 SSVAHTISTI AATDYPHCWA ELFDIIVKCL GGNEDSIHGA MQVLQDFSYD VEQIKELGPV 180
  181 VIPEVYRIFD SEQNYSIKTR VSAIRILKPL FASIAALITN KEEQSTMMSS ILTNFMDKLM 240
  241 HYLSMNSGAV SSFLLRTEII KVFTHLVNEM PKYINPFMDR VLPIVWQLLT QIAETYVKVS 300
  301 VNQTETSPLA SGDSEEDDEQ TNFQSLIIQI LEFINCILTC NKLRGSIKNV LADLIYITIV 360
  361 YIQLSEEQLE DWHDDPEKFV DDEDDGGVEL TVRMCGRDVL LAINDEFGAN AIQPLQEALG 420
  421 RHFSVADAEK AANNPNWWKI QEACMDAVHA FRDVILAGDS TFDLLNYLTI VRNLLVHQES 480
  481 PPLVGRALWT LSIYSKSDLY NPQMLTEILD VTLCSLSPEK SHILRISAVR TLNGFLQANE 540
  541 TIDGEKRTLL VSKLPGFLDG IMALVPGSKA AVLALLMEAL TFMVKFDAEF AFASQAKITP 600
  601 LAIAVFLKYT EDPYVLETVQ DLIKALCQRK ECLGPLQEKF IPTIVSILGL TGAASTEKQD 660
  661 IALDVLNTIV RYTEPPLNNS LLETAFPAII NCVLHTDDHA VMVAGGECLR SFINVSPEQI 720
  721 CSYKNGEGIN CIMQVVATVL LNPMNSEMTA AGQIGRLVIT IITKMGSMLG QNVDMLLKAV 780
  781 ISKMQNLECL KVIMNLVLIF AHLFLTQMDA VLNFLSTVPG PNGEPAMQFV LTNWLSRQNS 840
  841 FFGNYERKVT TMALCKLFEY GVATQDNRLT TITFKELVDD PTDTRRRTRS VAATTQKWVT 900
  901 IPALVKIFK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 101.0
Match: 2ot8A
Description: No description for 2ot8A was found.

Predicted Domain #2
Region A:
Residues: [910-1018]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VLISEYQHFQ EGKSDEPLTD SEEDGDDEDA PGNPDKPRYI SDLFESDEDN AEDEQLLQEL  60
   61 LKETNYQGDI ADNLQKFLTT FTQNEHFPTF YEHLTEGERL ILLSKVQQK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle