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View Structure Prediction Details

Protein: gi|10726443, gi|...
Organism: Drosophila melanogaster
Length: 966 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10726443, gi|....

Description E-value Query
Range
Subject
Range
gi|23170937, gi|... - gi|24645745|ref|NP_650014.1| chromosome associated protein H2, isoform B [Drosophila melanogaster], ...
1603.0 [0..1] [966..1]

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Predicted Domain #1
Region A:
Residues: [1-164]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERILPEEAE AAYLSEAREQ ILEIAKNRPG TQVAKCIRAY DEQQDLASLV VLLEELSKNT  60
   61 DYSTDLRISL GYYIEELLRH CLGRNDVSRR SAIVAAGSAL QYCGKIYGDR VEYLCQVVEH 120
  121 QIEALLTSEL QKETPSGSAA PEKNERRPEE TRKRHPKKLT NKEV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [165-333]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPYLLTLEPK RFKTMSDDKR FNAAGFVKCT RNRTIEYLYQ DHTPPNLWKH APIVDPHNPY  60
   61 DQDEKKQYKM FTYHVEHRYN TLLPDIPFER LNLIKEYVHT NQVNTTEILN EHMTTKEYLD 120
  121 EYIALENQML AARYGAIVTR RRRLVDSARF MEDNLDEGLA KKMCMDKNL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [334-534]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PMDTNETVLI DQSLVDENSR SLTTAESTMG ISQAENSTLK SSEVEATLSV SHIENSLSDS  60
   61 QEENPPLSST LAINESSVLD STRVDPIKDL TLDELLLIDS GISMEELSDI QMHTDLEDQR 120
  121 QLSPMLQMVS PSMEAKTLNI IEMDADLIMN VPREVSYPIL LNVMGLPIKR LRRKCIFKLP 180
  181 PEFDLFRQAR LPIKREGQQK S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [535-680]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTTPRTVLQI GREAPQNERE PGSPCSLEFD EDLSKLLCHT MSRRETILHI LPDFLGFRQR  60
   61 RPTFDSGFDI EEPRVSSCVS TIGEVKTELE DEIEANTNNL TDASASDALN ENVNDTKESG 120
  121 LGDSLAQELN ASTEPNAENN TANSSQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [681-883]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LEVTATESSG TLSGLETTVD LGMESALVSS VLDLSTEPSA MDSNIINVTQ PDNSDLEIST  60
   61 VQDQDTLHDE ADANDLSAET PNPIADSAVD DCSLIRDWHR RLAPALEAAH ERQNFNIKDL 120
  121 GTEILDICKA GNRTATLADV MADKDPSIMC RYMLASLVLT NHGNVSLDFE NRDKSKPIDM 180
  181 SQFRMHLKSM KRMEINPEDD VGN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [884-966]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 INAAQSKSTP RSKQLNDSAH KPRTSTTASA PTKRKSAENS LSEVFAKTVR LIQPIPKMWP  60
   61 TPSDADSGIS SMGSSLASTA RLK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle