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View Structure Prediction Details

Protein: FBpp0296944
Organism: Drosophila melanogaster
Length: 784 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0296944.

Description E-value Query
Range
Subject
Range
gi|33589346 - gi|33589346|gb|AAQ22440.1| RE64209p [Drosophila melanogaster]
1012.0 [0..1] [784..1]

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Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAMKDKPWL LLFGLLAALS CLASFGDAAY PYYGTKIGAL TRLHHGVSGD VYAVDSRTIF  60
   61 IKKFNYDGEA PAAYFYVGNT ARPSNEGAAR LRDERGGTAS LTRRYRNKDV TLSLPEGKTL 120
  121 RDIKWFSVWC DEFAVNFGDV SIPPNLDF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [149-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRPQKISALR GVHGVSSDNI VIVDAQTLLV PNFSYDGEAP DAKFWVGRGQ RPTSDGLRIP  60
   61 DENGKENPLR RYERKTIVLT LPEDLTIFDI GHFGVWCEAF TVDFGHVRLP EGLNVPPSLK 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [269-505]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGISPQSKL NCEVLYDDLA FEVRWAVAGE SIVVQLVAKL EPNHYMSFGI SPNKNISQMI  60
   61 GADAVVAWVD PQTGNGFATD YFLEGKAQCS GGRGACPDTK ISEKTNSIRL LNAAMVNGYS 120
  121 IVTYQRSLAA TDRLDLPISI TGAESVVWAI GPLNDYQEVS FHTFYNKHLH QIEFGRQPKW 180
  181 NCPLPEGARG NSNSSEQEDS APAAQSSTGG AGYPPAGRPN VEPDEEFYEN RAEALHR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.66
Match: 1d7cA
Description: Cytochrome domain of cellobiose dehydrogenase
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [506-579]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QPPQRRQETA IITQRRPVPT PKPVNSNGAW DIPAIQCHEP EDGVFYAQMG PTGGKHGYPA  60
   61 ITGHVGWGIS WYIN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [580-784]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLLIPEIHVV RGKTYTFVVE GGNNPDIPAK YHPFYISDDP VGGYEHKREE EKKAVRIYAG  60
   61 VHRSRSGQVT PTGVGRLCNW TPDVEGPPAD DYQSFGAYQR TLTLKCDAGE PGVITWKPDR 120
  121 NTPDTVYYHC FTHRYLGWKI HVHDSCDSEA GGLKGAASER HEIRLPAKAT VAEPAPVHED 180
  181 YAGEASVRHE TKMASALLRL SRRAY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle