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View Structure Prediction Details

Protein: CG6293-PA, FBpp0...
Organism: Drosophila melanogaster
Length: 573 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6293-PA, FBpp0....

Description E-value Query
Range
Subject
Range
gi|73949214 - gi|73949214|ref|XP_535207.2| PREDICTED: similar to Solute carrier family 23, member 1 (Sodium-depend...
365.0 [0..9] [572..182]

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Predicted Domain #1
Region A:
Residues: [1-184]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELNNVTIED ATDASKSYSQ AANTPPSNEK PKPQLLYAIN DNPPWYLSIF LAFQHYLTMI  60
   61 GAIVSIPFIL TPALCMSDED ANRGIIISTM IFVTGIVTYF QATWGVRLPI VQGGTISFLV 120
  121 PTLAILALPQ WKCPEQAVMD AMDEAEREEL WQVRMRELSG AIAVSAMVQV ILGYTGLVGK 180
  181 ILKY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [185-303]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTPLTIVPTV SLVGLTLFEH AAETASKHWG IAVGTTGMLT LFSQIMSNVP VPILAYRKGH  60
   61 GLEIRQFQLF RLFPVLLTIM IMWGLCGILT ATDVFPPSHP SRTDVRLNVL TSAKWFYVP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [304-573]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YPGQFGWPSV TLSGVLGMLA GVLACTVESL SYYPTVSQMS GAHSPPLHAI NRGIGTEGFG  60
   61 TVLAGLWGAG NGTNTFGENV GAIGVTKIGS RRVIQWAALI MVLQGVIGKF GAIFILIPDS 120
  121 VVGGIFCVMF GMIIAFGLST LQYVDLRSAR NLYILGLSIF FPMVLCRWMQ KNPGAIDTGN 180
  181 KTVDSTLSVL LGTTILVGGV LGCLLDNIIP GTPEERGLID WANEMPLGDD NVNDGTATDY 240
  241 DFPLGMDAIR RWKWTYYIPF MPTYKLQKQS 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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