| Protein: | Best1-PA |
| Organism: | Drosophila melanogaster |
| Length: | 721 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Best1-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
602.0 | [0..1] | [717..1] |
|
Region A: Residues: [1-153] |
1 11 21 31 41 51
| | | | | |
1 MTITYTGEVA TCRGFGCFLK LLLRWRGSIY KLVWLDLLAF LTIYYAINMV YRFGLNPAQK 60
61 ETFEAIVQYC DSYRELIPLS FVLGFYVSIV MTRWWNQYTS IPWPDPIAVF VSSNVHGQDE 120
121 RGRMMRRTIM RYVCLCLTMV LANVSPRVKK RFP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [154-340] |
1 11 21 31 41 51
| | | | | |
1 GLNNLVEAGL LNDNEKTIIE TMNKAFPRPS KHWLPIVWAA SIITRARKEG RIRDDFAVKT 60
61 IIDELNKFRG QCGLLISYDT ISVPLVYTQV VTLAVYSYFL TCCMGQQWTD GKVVGNTTYL 120
121 NKVDLYFPVF TTLQFFFYMG WLKVAESLIN PFGEDDDDFE VNWMVDRNLQ VSYLIVDEMH 180
181 HDHPELL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [341-721] |
1 11 21 31 41 51
| | | | | |
1 KDQYWDEVFP NELPYTIAAE RFRENHPEPS TAKIEVPKNA AMPSTMSSVR IDEMADDASG 60
61 IHFSAGNGKM RLDSSPSLVS VSGTLSRVNT VASALKRFLS RDDSRPGSAT PSQDQPYKFP 120
121 ASASSASLSG AVVGSATSAG KPAGSLRITQ QVIEEVDEQA TITSMRANDP RPNVMDIFAQ 180
181 TSSGAGTSGP LQPPPAHSEP VDIPSRPPSY NRAQSQYEPN LFPPGGVDAL LSTSAPAGGS 240
241 PLLLSNAATA PSSPVGESSK SLYDPQKGAS RETVESMDLR SSTDLLGDAA VQPEDEGDDF 300
301 DKLKAEREKE KLMRQQKNLA RTISTAPGME ATAVPMVPMV PVNVAVQQAQ LQPVASSADL 360
361 LAGGDQFSNS TMKSEDAING S
|
| Detection Method: | |
| Confidence: | 1.28 |
| Match: | 1h1kI |
| Description: | THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA |
Matching Structure (courtesy of the PDB): |
|
