YRC Public Data Repository - Protein Structure Prediction

Protein:	CG9471-PB, CG9471-PA
Organism:	Drosophila melanogaster
Length:	204 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9471-PB, CG9471-PA.

Description	E-value	Query Range	Subject Range
gi\|18978160, gi\|... - gi\|18978160\|ref\|NP_579517.1\| NDP-sugar dehydratase or epimerase [Pyrococcus furiosus DSM 3638], gi\|1...	178.0	[0..1]	[204..1]
gi\|7429922 - pir\|\|A71183 probable UDP-glucose 4-epimerase - Pyrococcus horikoshii gi\|14591500, gi\|... - gi\|3258173\|dbj\|BAA30856.1\| 306aa long hypothetical UDP-glucose 4-epimerase [Pyrococcus horikoshii OT...	175.0	[0..1]	[203..1]
gi\|14520521, gi\|... - gi\|5457737\|emb\|CAB49227.1\| galE-1 UDP-glucose 4-epimerase) [Pyrococcus abyssi GE5], gi\|14520521\|ref\|... gi\|5457737, gi\|7... - pir\|\|D75143 udp-glucose 4-epimerase (gale-1) PAB2145 - Pyrococcus abyssi (strain Orsay), gi\|5457737\|...	175.0	[0..1]	[203..1]
gi\|4240415 - gi\|4240415\|gb\|AAD13546.1\| NDP-hexose 4,6-dehydratase homolog [Streptomyces cyanogenus]	173.0	[0..1]	[202..1]
gi\|20093250, gi\|... - gi\|20093250\|ref\|NP_619325.1\| dTDP-glucose 4,6-dehydratase [Methanosarcina acetivorans C2A], gi\|19918...	172.0	[0..1]	[201..1]
gi\|21227295, gi\|... - gi\|21227295\|ref\|NP_633217.1\| dTDP-glucose 4,6-dehydratase [Methanosarcina mazei Go1], gi\|20905647\|gb...	172.0	[0..1]	[197..1]
GALE_METJA - Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii GN=MJ0211 PE=3 SV=1 GALE_METJA - Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JA...	171.0	[0..4]	[204..2]
gi\|72395839, gi\|... - gi\|73668677\|ref\|YP_304692.1\| dTDP-glucose 4,6-dehydratase [Methanosarcina barkeri str. Fusaro], gi\|7...	168.0	[0..1]	[201..1]
gi\|57159263, gi\|... - gi\|57640939\|ref\|YP_183417.1\| UDP-glucose 4-epimerase [Thermococcus kodakarensis KOD1], gi\|57159263\|d...	167.0	[0..2]	[203..5]

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Predicted Domain #1

Region A:
Residues: [1-204]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRIAIIGGT GMTGECAVDH ALQKGLSVKL LYRSEKTVPE RFKSKVELVK GDVTNYEDVQ  60
   61 RVIEGVDAVA VILGTRNKLE ATTELSRGTE NLIKAMKEAK LTKFSIVMSS FLLRPLNEVP 120
  121 TVFHRLNEEH QRMLDLTKAC DLDWIAILPP HIADEPATAY TVLHDEAPGR LVSKYDLGKF 180
  181 IIDSLEQPEH YRKVCGIGKS PKSA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	21.69897
Match:	1hdoA
Description:	Biliverdin IX beta reductase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.03099072397093	bayes_pls_golite062009
oxidoreductase activity	0.442294542097958	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: